RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 TRIM10Q9UDY6 481 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 EBF1Q9UH73 591 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 VPS51Q9UID3 782 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 SCML1Q9UN30 329 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 CACNA1IQ9P0X4 2223 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 ATG2BQ96BY7 2078 aa8.89□□□□□ -0.99
COL28A1-205ENST00000453441 CACNA1HO95180 2353 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 hCG_1818297A0A087WSY0 165 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 A0A0D9SEW6 157 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 FAM86C2PA6NEL3 165 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 C3orf70A6NLC5 250 aaPredicted RBP8.88□□□□□ -0.99
COL28A1-205ENST00000453441 PRAMEF11O60813 436 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 ZMPSTE24O75844 475 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 TJP3O95049 919 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 EPHX1P07099 455 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 CD48P09326 243 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 TNNT1P13805 278 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 AMPD1P23109 780 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 HSPA9P38646 679 aaKnown RBP8.88□□□□□ -0.99
COL28A1-205ENST00000453441 RECQLP46063 649 aaPredicted RBP8.88□□□□□ -0.99
COL28A1-205ENST00000453441 SERPINH1P50454 418 aaKnown RBP8.88□□□□□ -0.99
COL28A1-205ENST00000453441 PEX5P50542 639 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 ZBTB16Q05516 673 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 IL10RBQ08334 325 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 GALNT2Q10471 571 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 CAMK2GQ13555 558 aaPredicted RBP8.88□□□□□ -0.99
COL28A1-205ENST00000453441 BYSLQ13895 437 aaKnown RBP8.88□□□□□ -0.99
COL28A1-205ENST00000453441 ELAVL3Q14576 367 aaKnown RBP8.88□□□□□ -0.99
COL28A1-205ENST00000453441 PDK1Q15118 436 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 RPS6KA1Q15418 735 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 ATP13A4Q4VNC1 1196 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 MEI1Q5TIA1 1274 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 NCBP2-AS2Q69YL0 99 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 C11orf74Q86VG3 221 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 ZNF354CQ86Y25 554 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 CPNE8Q86YQ8 564 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 RFX6Q8HWS3 928 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 CCDC50Q8IVM0 306 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 ARHGAP12Q8IWW6 846 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 REXO1L1PQ8IX06 675 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 SH2D3CQ8N5H7 860 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 ATPAF2Q8N5M1 289 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 ATP11CQ8NB49 1132 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 TSTD1Q8NFU3 115 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 OR7D4Q8NG98 312 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 OR52K2Q8NGK3 314 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 CYB5D2Q8WUJ1 264 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 HMCESQ96FZ2 354 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 LRIG1Q96JA1 1093 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 FERMT1Q9BQL6 677 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 KLC2Q9H0B6 622 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 CARD9Q9H257 536 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 GOLPH3Q9H4A6 298 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 ALG2Q9H553 416 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 NOL6Q9H6R4 1146 aaKnown RBP8.88□□□□□ -0.99
COL28A1-205ENST00000453441 SP110Q9HB58 689 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 NDFIP2Q9NV92 336 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 KLHL11Q9NVR0 708 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 UBA2Q9UBT2 640 aaPredicted RBP8.88□□□□□ -0.99
COL28A1-205ENST00000453441 AMACRQ9UHK6 382 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 HCN2Q9UL51 889 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 JRKLQ9Y4A0 524 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 HYOU1Q9Y4L1 999 aa8.88□□□□□ -0.99
COL28A1-205ENST00000453441 A0A0U1RQJ8 604 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 APOC4-APOC2K7ER74 178 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 SGK1O00141 431 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 DFFAO00273 331 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 PPP1R12AO14974 1030 aaPredicted RBP8.87□□□□□ -0.99
COL28A1-205ENST00000453441 MTSS1O43312 755 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 RNASEH1O60930 286 aaKnown RBP8.87□□□□□ -0.99
COL28A1-205ENST00000453441 ADAM23O75077 832 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 FTCDO95954 541 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 GSRP00390 522 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 APOC2P02655 101 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 SRCP12931 536 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 CNR2P34972 360 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 ACVRL1P37023 503 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 IL12RB1P42701 662 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 MAPK8P45983 427 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 PAPOLAP51003 745 aaKnown RBP8.87□□□□□ -0.99
COL28A1-205ENST00000453441 RENBPP51606 427 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 ARF5P84085 180 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 PTSQ03393 145 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 CCDC15Q0P6D6 951 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 CLN3Q13286 438 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 GAS6Q14393 721 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 GRM3Q14832 879 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 RALGPS1Q5JS13 557 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 SEL1L2Q5TEA6 688 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 EMC10Q5UCC4 262 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 MFSD7Q6UXD7 560 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 BBS12Q6ZW61 710 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 RASSF3Q86WH2 238 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 SFTPA1Q8IWL2 248 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 CCDC33Q8N5R6 958 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 NPWQ8N729 165 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 PQLC3Q8N755 202 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 OR2T3Q8NH03 318 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 MAIP1Q8WWC4 291 aa8.87□□□□□ -0.99
COL28A1-205ENST00000453441 ATRIPQ8WXE1 791 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms