RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 VPS28Q9UK41 221 aa15.98■□□□□ 0.15
VCX3B-204ENST00000453306 ERVW-1Q9UQF0 538 aa15.98■□□□□ 0.15
VCX3B-204ENST00000453306 EML5Q05BV3 1969 aa15.98■□□□□ 0.15
VCX3B-204ENST00000453306 APOL1O14791 398 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 MAFKO60675 156 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 ZNF821O75541 412 aaPredicted RBP15.97■□□□□ 0.15
VCX3B-204ENST00000453306 VAV1P15498 845 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 WASP42768 502 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 GALNT2Q10471 571 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 ENPP2Q13822 863 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 ZNF234Q14588 700 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 PARP15Q460N3 678 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 PAPD7Q5XG87 772 aaKnown RBP15.97■□□□□ 0.15
VCX3B-204ENST00000453306 DCAF4L2Q8NA75 395 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 IL17RCQ8NAC3 791 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 UBE2Q2Q8WVN8 375 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 PIGKQ92643 395 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 HAUS1Q96CS2 278 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 OLFM3Q96PB7 478 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 NUSAP1Q9BXS6 441 aaKnown RBP15.97■□□□□ 0.15
VCX3B-204ENST00000453306 CARD9Q9H257 536 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 C10orf88Q9H8K7 445 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 CD248Q9HCU0 757 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 ATP13A1Q9HD20 1204 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 CACNA2D2Q9NY47 1150 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 THAP10Q9P2Z0 257 aaPredicted RBP15.97■□□□□ 0.15
VCX3B-204ENST00000453306 EVLQ9UI08 416 aaPredicted RBP15.97■□□□□ 0.15
VCX3B-204ENST00000453306 SNX12Q9UMY4 172 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 EFR3BQ9Y2G0 817 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 HEY1Q9Y5J3 304 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 ATG2BQ96BY7 2078 aa15.97■□□□□ 0.15
VCX3B-204ENST00000453306 KIAA1549LQ6ZVL6 1849 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 CNOT1A5YKK6 2376 aaKnown RBP15.96■□□□□ 0.15
VCX3B-204ENST00000453306 CBX4O00257 560 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 DFFAO00273 331 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 ZBTB24O43167 697 aaPredicted RBP15.96■□□□□ 0.15
VCX3B-204ENST00000453306 TIMM44O43615 452 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 PRAMEF11O60813 436 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 DLDP09622 509 aaKnown RBP15.96■□□□□ 0.15
VCX3B-204ENST00000453306 CEACAM1P13688 526 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 POLR2EP19388 210 aaKnown RBP15.96■□□□□ 0.15
VCX3B-204ENST00000453306 BCKDHBP21953 392 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 PRKCHP24723 683 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 P2RY2P41231 377 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 IL12RB1P42701 662 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 OXCT1P55809 520 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 ECT2LQ008S8 904 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 CYTH1Q15438 398 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 TMEM92Q6UXU6 159 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 SYT10Q6XYQ8 523 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 SLC13A5Q86YT5 568 aaPredicted RBP15.96■□□□□ 0.15
VCX3B-204ENST00000453306 PGBD3Q8N328 593 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 LZTR1Q8N653 840 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 ZNF366Q8N895 744 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 ZNF557Q8N988 423 aaPredicted RBP15.96■□□□□ 0.15
VCX3B-204ENST00000453306 FRS2Q8WU20 508 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 ERLEC1Q96DZ1 483 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 NSMCE3Q96MG7 304 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 OSBPL9Q96SU4 736 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 LGMNQ99538 433 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 MAK16Q9BXY0 300 aaKnown RBP15.96■□□□□ 0.15
VCX3B-204ENST00000453306 TMEM245Q9H330 911 aa15.96■□□□□ 0.15
VCX3B-204ENST00000453306 IPO11Q9UI26 975 aaKnown RBP15.96■□□□□ 0.15
VCX3B-204ENST00000453306 USP24Q9UPU5 2620 aa15.96■□□□□ 0.14
VCX3B-204ENST00000453306 TTC34A8MYJ7 566 aa15.95■□□□□ 0.14
VCX3B-204ENST00000453306 SGK1O00141 431 aa15.95■□□□□ 0.14
VCX3B-204ENST00000453306 RNF103O00237 685 aa15.95■□□□□ 0.14
VCX3B-204ENST00000453306 CEP104O60308 925 aa15.95■□□□□ 0.14
VCX3B-204ENST00000453306 SRCP12931 536 aa15.95■□□□□ 0.14
VCX3B-204ENST00000453306 HLA-EP13747 358 aa15.95■□□□□ 0.14
VCX3B-204ENST00000453306 CSRP1P21291 193 aaKnown RBP15.95■□□□□ 0.14
VCX3B-204ENST00000453306 TFDP2Q14188 446 aa15.95■□□□□ 0.14
VCX3B-204ENST00000453306 EIF4HQ15056 248 aaKnown RBP15.95■□□□□ 0.14
VCX3B-204ENST00000453306 ADAT2Q7Z6V5 191 aaKnown RBP15.95■□□□□ 0.14
VCX3B-204ENST00000453306 ZSCAN30Q86W11 494 aa15.95■□□□□ 0.14
VCX3B-204ENST00000453306 CCDC117Q8IWD4 279 aaPredicted RBP15.95■□□□□ 0.14
VCX3B-204ENST00000453306 RASGEF1CQ8N431 466 aa15.95■□□□□ 0.14
VCX3B-204ENST00000453306 ACTL9Q8TC94 416 aa15.95■□□□□ 0.14
VCX3B-204ENST00000453306 HMGB4Q8WW32 186 aa15.95■□□□□ 0.14
VCX3B-204ENST00000453306 C16orf45Q96MC5 204 aaPredicted RBP15.95■□□□□ 0.14
VCX3B-204ENST00000453306 STON1Q9Y6Q2 735 aa15.95■□□□□ 0.14
VCX3B-204ENST00000453306 A0A1W2PQF6 199 aa15.94■□□□□ 0.14
VCX3B-204ENST00000453306 TCRBV21S2A2A0A5A6 115 aa15.94■□□□□ 0.14
VCX3B-204ENST00000453306 ARHGAP42A6NI28 874 aa15.94■□□□□ 0.14
VCX3B-204ENST00000453306 PDE2AO00408 941 aaPredicted RBP15.94■□□□□ 0.14
VCX3B-204ENST00000453306 MUSKO15146 869 aa15.94■□□□□ 0.14
VCX3B-204ENST00000453306 ATP9BO43861 1147 aa15.94■□□□□ 0.14
VCX3B-204ENST00000453306 HOXD12P35452 270 aa15.94■□□□□ 0.14
VCX3B-204ENST00000453306 GARSP41250 739 aaKnown RBP15.94■□□□□ 0.14
VCX3B-204ENST00000453306 IHHQ14623 411 aa15.94■□□□□ 0.14
VCX3B-204ENST00000453306 KCTD19Q17RG1 926 aaPredicted RBP15.94■□□□□ 0.14
VCX3B-204ENST00000453306 ODF2Q5BJF6 829 aa15.94■□□□□ 0.14
VCX3B-204ENST00000453306 TRIM61Q5EBN2 209 aa15.94■□□□□ 0.14
VCX3B-204ENST00000453306 KIAA1211LQ6NV74 962 aa15.94■□□□□ 0.14
VCX3B-204ENST00000453306 SLC36A4Q6YBV0 504 aa15.94■□□□□ 0.14
VCX3B-204ENST00000453306 SYT12Q8IV01 421 aa15.94■□□□□ 0.14
VCX3B-204ENST00000453306 ZNF513Q8N8E2 541 aaPredicted RBP15.94■□□□□ 0.14
VCX3B-204ENST00000453306 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.94■□□□□ 0.14
VCX3B-204ENST00000453306 TSGA13Q96PP4 275 aa15.94■□□□□ 0.14
VCX3B-204ENST00000453306 NAPGQ99747 312 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms