RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 C1orf131Q8NDD1 294 aaKnown RBP14.59□□□□□ -0.07
LYSMD3-202ENST00000453259 PGAP3Q96FM1 320 aaPredicted RBP14.59□□□□□ -0.07
LYSMD3-202ENST00000453259 PPP1R13BQ96KQ4 1090 aa14.59□□□□□ -0.07
LYSMD3-202ENST00000453259 BMFQ96LC9 184 aa14.59□□□□□ -0.07
LYSMD3-202ENST00000453259 PSMB7Q99436 277 aa14.59□□□□□ -0.07
LYSMD3-202ENST00000453259 BOCQ9BWV1 1114 aa14.59□□□□□ -0.07
LYSMD3-202ENST00000453259 INTS2Q9H0H0 1204 aaKnown RBP14.59□□□□□ -0.07
LYSMD3-202ENST00000453259 ARHGEF38Q9NXL2 777 aa14.59□□□□□ -0.07
LYSMD3-202ENST00000453259 SPASTQ9UBP0 616 aa14.59□□□□□ -0.07
LYSMD3-202ENST00000453259 IPO11Q9UI26 975 aaKnown RBP14.59□□□□□ -0.07
LYSMD3-202ENST00000453259 ACSL6Q9UKU0 697 aa14.59□□□□□ -0.07
LYSMD3-202ENST00000453259 ATXN7L1Q9ULK2 861 aaPredicted RBP14.59□□□□□ -0.07
LYSMD3-202ENST00000453259 STAP1Q9ULZ2 295 aa14.59□□□□□ -0.07
LYSMD3-202ENST00000453259 PCDHGA7Q9Y5G6 932 aa14.59□□□□□ -0.07
LYSMD3-202ENST00000453259 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.59□□□□□ -0.07
LYSMD3-202ENST00000453259 ENTPD2Q9Y5L3 495 aa14.59□□□□□ -0.07
LYSMD3-202ENST00000453259 SPTA1P02549 2419 aa14.58□□□□□ -0.07
LYSMD3-202ENST00000453259 IGLV3-10A0A075B6K4 115 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 CCDC187A0A096LP49 1063 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 ILVBLA1L0T0 632 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 DRGXA6NNA5 263 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 SLC28A2O43868 658 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 LEFTY1O75610 366 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 MT-CO1P00395 513 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 CALCAP01258 141 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 L1CAMP32004 1257 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 CXCR3P49682 368 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 CSRP3P50461 194 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 INHBCP55103 352 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 NME3Q13232 169 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 SGCGQ13326 291 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 TAF5Q15542 800 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 CDKN3Q16667 212 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 ARL13BQ3SXY8 428 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 ARSIQ5FYB1 569 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 TTI2Q6NXR4 508 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 OLFML1Q6UWY5 402 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 EFL1Q7Z2Z2 1120 aaKnown RBP14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 SDR16C5Q8N3Y7 309 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 GRIN3AQ8TCU5 1115 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 KLK6Q92876 244 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 ATXN7L3BQ96GX2 97 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 LIN37Q96GY3 246 aaPredicted RBP14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 PRR11Q96HE9 360 aaPredicted RBP14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 CCNL2Q96S94 520 aaPredicted RBP14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 CPXM1Q96SM3 734 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 C1QTNF2Q9BXJ5 285 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 SEMA4CQ9C0C4 833 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 RETREG1Q9H6L5 497 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 WDCPQ9H6R7 721 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 UBE2TQ9NPD8 197 aaPredicted RBP14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 ZDHHC9Q9Y397 364 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 FADS3Q9Y5Q0 445 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 WASF2Q9Y6W5 498 aa14.58□□□□□ -0.08
LYSMD3-202ENST00000453259 DOCK9Q9BZ29 2069 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 SYNJ2BP-COX16A0A087WUM0 186 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 CPED1A4D0V7 1026 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 GOLGA6L4A6NEF3 574 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 POM121BA6NF01 834 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 LMO7DNF2Z398 122 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 M0QYT0 321 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 ARHGAP6O43182 974 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 NEBLO76041 1014 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 ITGB2P05107 769 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 SFTPCP11686 197 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 JUNDP17535 347 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 RRM1P23921 792 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 SCNN1AP37088 669 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 ETFBP38117 255 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 SERPINH1P50454 418 aaKnown RBP14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 IRAK1P51617 712 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 GEMIN4P57678 1058 aaKnown RBP14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 PFN3P60673 137 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 YPEL5P62699 121 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 C6orf132Q5T0Z8 1188 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 OR6B2Q6IFH4 312 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 GUSBP11Q6P575 273 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 DPY19L3Q6ZPD9 716 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 NT5C3BQ969T7 300 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 ISG20Q96AZ6 181 aaKnown RBP14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 HEPHQ9BQS7 1158 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 OSBPL2Q9H1P3 480 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 COX16Q9P0S2 106 aa14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 COL27A1Q8IZC6 1860 aaPredicted RBP14.57□□□□□ -0.08
LYSMD3-202ENST00000453259 TRPM6Q9BX84 2022 aa14.56□□□□□ -0.08
LYSMD3-202ENST00000453259 SMAD6O43541 496 aaKnown RBP14.56□□□□□ -0.08
LYSMD3-202ENST00000453259 SNAP91O60641 907 aa14.56□□□□□ -0.08
LYSMD3-202ENST00000453259 FGFR1OPO95684 399 aaKnown RBP14.56□□□□□ -0.08
LYSMD3-202ENST00000453259 PAK4O96013 591 aaPredicted RBP14.56□□□□□ -0.08
LYSMD3-202ENST00000453259 OR1E1P30953 314 aa14.56□□□□□ -0.08
LYSMD3-202ENST00000453259 NUMBP49757 651 aa14.56□□□□□ -0.08
LYSMD3-202ENST00000453259 SLC6A3Q01959 620 aa14.56□□□□□ -0.08
LYSMD3-202ENST00000453259 CLN3Q13286 438 aa14.56□□□□□ -0.08
LYSMD3-202ENST00000453259 PDE1CQ14123 709 aaPredicted RBP14.56□□□□□ -0.08
LYSMD3-202ENST00000453259 SPIDRQ14159 915 aa14.56□□□□□ -0.08
LYSMD3-202ENST00000453259 ESRP1Q6NXG1 681 aaKnown RBP14.56□□□□□ -0.08
LYSMD3-202ENST00000453259 LVRNQ6Q4G3 990 aa14.56□□□□□ -0.08
LYSMD3-202ENST00000453259 ZNF683Q8IZ20 524 aa14.56□□□□□ -0.08
LYSMD3-202ENST00000453259 CHST14Q8NCH0 376 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms