RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 SYN2Q92777 582 aaPredicted RBP18.27■□□□□ 0.52
CTNS-204ENST00000452111 SKA1Q96BD8 255 aa18.27■□□□□ 0.52
CTNS-204ENST00000452111 HMCESQ96FZ2 354 aa18.27■□□□□ 0.52
CTNS-204ENST00000452111 PPP1R16AQ96I34 528 aa18.27■□□□□ 0.52
CTNS-204ENST00000452111 SNRNP25Q9BV90 132 aaKnown RBP18.27■□□□□ 0.52
CTNS-204ENST00000452111 XPO4Q9C0E2 1151 aaKnown RBP18.27■□□□□ 0.52
CTNS-204ENST00000452111 ISCUQ9H1K1 167 aa18.27■□□□□ 0.52
CTNS-204ENST00000452111 DHX35Q9H5Z1 703 aaKnown RBP18.27■□□□□ 0.52
CTNS-204ENST00000452111 PREBQ9HCU5 417 aa18.27■□□□□ 0.52
CTNS-204ENST00000452111 ARHGAP20Q9P2F6 1191 aa18.27■□□□□ 0.52
CTNS-204ENST00000452111 HECAQ9UBI9 543 aaPredicted RBP18.27■□□□□ 0.52
CTNS-204ENST00000452111 CAPN11Q9UMQ6 739 aa18.27■□□□□ 0.52
CTNS-204ENST00000452111 LUC7L2Q9Y383 392 aaKnown RBP18.27■□□□□ 0.52
CTNS-204ENST00000452111 PCDHB9Q9Y5E1 797 aa18.27■□□□□ 0.52
CTNS-204ENST00000452111 BZW2Q9Y6E2 419 aaKnown RBP18.27■□□□□ 0.52
CTNS-204ENST00000452111 TPRP12270 2363 aaKnown RBP18.26■□□□□ 0.51
CTNS-204ENST00000452111 CXorf51AA0A1B0GTR3 108 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 A0A1W2PR77 199 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 RASA4BC9J798 803 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 FGF10O15520 208 aaPredicted RBP18.26■□□□□ 0.51
CTNS-204ENST00000452111 RASA4O43374 803 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 PRPSAP2O60256 369 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 RNGTTO60942 597 aaKnown RBP18.26■□□□□ 0.51
CTNS-204ENST00000452111 TOP3BO95985 862 aaKnown RBP18.26■□□□□ 0.51
CTNS-204ENST00000452111 SPINK2P20155 84 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 MIPP30301 263 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 GKP32189 559 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 CCT8P50990 548 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 CCDC15Q0P6D6 951 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 HNRNPDQ14103 355 aaKnown RBP18.26■□□□□ 0.51
CTNS-204ENST00000452111 PRAMEF14Q5SWL7 426 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 NAPEPLDQ6IQ20 393 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 VPS36Q86VN1 386 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 NETO2Q8NC67 525 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 FNIP1Q8TF40 1166 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 KLK6Q92876 244 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 ISG20Q96AZ6 181 aaKnown RBP18.26■□□□□ 0.51
CTNS-204ENST00000452111 IQCDQ96DY2 449 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 HDAC8Q9BY41 377 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 KLC2Q9H0B6 622 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 MRPL47Q9HD33 250 aaKnown RBP18.26■□□□□ 0.51
CTNS-204ENST00000452111 KNL1Q8NG31 2342 aa18.26■□□□□ 0.51
CTNS-204ENST00000452111 A0A1W2PQU0 124 aa18.25■□□□□ 0.51
CTNS-204ENST00000452111 WASH4PA8MWX3 477 aa18.25■□□□□ 0.51
CTNS-204ENST00000452111 EEF2KO00418 725 aaKnown RBP18.25■□□□□ 0.51
CTNS-204ENST00000452111 TMCC1O94876 653 aa18.25■□□□□ 0.51
CTNS-204ENST00000452111 TPM3P06753 285 aa18.25■□□□□ 0.51
CTNS-204ENST00000452111 NEK3P51956 506 aa18.25■□□□□ 0.51
CTNS-204ENST00000452111 YBEYP58557 167 aaPredicted RBP18.25■□□□□ 0.51
CTNS-204ENST00000452111 SHC2P98077 582 aa18.25■□□□□ 0.51
CTNS-204ENST00000452111 NFKBIBQ15653 356 aa18.25■□□□□ 0.51
CTNS-204ENST00000452111 TRIP6Q15654 476 aaKnown RBP18.25■□□□□ 0.51
CTNS-204ENST00000452111 ZNF423Q2M1K9 1284 aa18.25■□□□□ 0.51
CTNS-204ENST00000452111 PARP15Q460N3 678 aa18.25■□□□□ 0.51
CTNS-204ENST00000452111 SETMARQ53H47 684 aaPredicted RBP18.25■□□□□ 0.51
CTNS-204ENST00000452111 SLC45A4Q5BKX6 768 aa18.25■□□□□ 0.51
CTNS-204ENST00000452111 ATXN7L2Q5T6C5 722 aaPredicted RBP18.25■□□□□ 0.51
CTNS-204ENST00000452111 ERMARDQ5T6L9 678 aa18.25■□□□□ 0.51
CTNS-204ENST00000452111 OR2AP1Q8NGE2 309 aa18.25■□□□□ 0.51
CTNS-204ENST00000452111 CELF6Q96J87 481 aaKnown RBP18.25■□□□□ 0.51
CTNS-204ENST00000452111 KCTD15Q96SI1 283 aaPredicted RBP18.25■□□□□ 0.51
CTNS-204ENST00000452111 MYOCQ99972 504 aa18.25■□□□□ 0.51
CTNS-204ENST00000452111 PCOLCE2Q9UKZ9 415 aa18.25■□□□□ 0.51
CTNS-204ENST00000452111 DMTF1Q9Y222 760 aa18.25■□□□□ 0.51
CTNS-204ENST00000452111 CA5BQ9Y2D0 317 aa18.25■□□□□ 0.51
CTNS-204ENST00000452111 PCDHGB2Q9Y5G2 931 aa18.25■□□□□ 0.51
CTNS-204ENST00000452111 ACACBO00763 2458 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 ZSCAN5CA6NGD5 496 aaPredicted RBP18.24■□□□□ 0.51
CTNS-204ENST00000452111 KRIT1O00522 736 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 SLC31A1O15431 190 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 FLRT2O43155 660 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 LRCH4O75427 683 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 PCDH8O95206 1070 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 GSRP00390 522 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 ADRB3P13945 408 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 PRLRP16471 622 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 ITGB7P26010 798 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 CASP14P31944 242 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 HTR7P34969 479 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 SNRPD1P62314 119 aaKnown RBP18.24■□□□□ 0.51
CTNS-204ENST00000452111 SUZ12Q15022 739 aaKnown RBP18.24■□□□□ 0.51
CTNS-204ENST00000452111 PPP6R3Q5H9R7 873 aaPredicted RBP18.24■□□□□ 0.51
CTNS-204ENST00000452111 FBXL19Q6PCT2 694 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 CYP4V2Q6ZWL3 525 aaPredicted RBP18.24■□□□□ 0.51
CTNS-204ENST00000452111 PARS2Q7L3T8 475 aaKnown RBP18.24■□□□□ 0.51
CTNS-204ENST00000452111 HORMAD1Q86X24 394 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 UMODL1-AS1Q8N2C9 162 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 THAP2Q9H0W7 228 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 TSPY26PQ9H489 355 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 GDF3Q9NR23 364 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 BTBD3Q9Y2F9 522 aa18.24■□□□□ 0.51
CTNS-204ENST00000452111 PLXNA2O75051 1894 aa18.23■□□□□ 0.51
CTNS-204ENST00000452111 A0A087X0T9 212 aa18.23■□□□□ 0.51
CTNS-204ENST00000452111 TLR4O00206 839 aa18.23■□□□□ 0.51
CTNS-204ENST00000452111 DAPK3O43293 454 aa18.23■□□□□ 0.51
CTNS-204ENST00000452111 CBFA2T3O75081 653 aa18.23■□□□□ 0.51
CTNS-204ENST00000452111 FAM228BP0C875 321 aa18.23■□□□□ 0.51
CTNS-204ENST00000452111 NUDT1P36639 197 aa18.23■□□□□ 0.51
CTNS-204ENST00000452111 SERINC3Q13530 473 aa18.23■□□□□ 0.51
CTNS-204ENST00000452111 STAT4Q14765 748 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms