RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 ENDOD1O94919 500 aa22.1■■□□□ 1.13
C9orf3-208ENST00000451893 KRT3P12035 628 aa22.1■■□□□ 1.13
C9orf3-208ENST00000451893 ETFBP38117 255 aa22.1■■□□□ 1.13
C9orf3-208ENST00000451893 METAP1P53582 386 aa22.1■■□□□ 1.13
C9orf3-208ENST00000451893 SLC18A3Q16572 532 aa22.1■■□□□ 1.13
C9orf3-208ENST00000451893 C15orf59Q2T9L4 293 aaPredicted RBP22.1■■□□□ 1.13
C9orf3-208ENST00000451893 C22orf39Q6P5X5 142 aa22.1■■□□□ 1.13
C9orf3-208ENST00000451893 ZNF783Q6ZMS7 281 aa22.1■■□□□ 1.13
C9orf3-208ENST00000451893 NYAP1Q6ZVC0 841 aa22.1■■□□□ 1.13
C9orf3-208ENST00000451893 GLRX5Q86SX6 157 aa22.1■■□□□ 1.13
C9orf3-208ENST00000451893 OXR1Q8N573 874 aa22.1■■□□□ 1.13
C9orf3-208ENST00000451893 PSMB7Q99436 277 aa22.1■■□□□ 1.13
C9orf3-208ENST00000451893 TSGA10Q9BZW7 698 aa22.1■■□□□ 1.13
C9orf3-208ENST00000451893 TNKS2Q9H2K2 1166 aa22.1■■□□□ 1.13
C9orf3-208ENST00000451893 HPCAL4Q9UM19 191 aa22.1■■□□□ 1.13
C9orf3-208ENST00000451893 A0A1B0GTQ1 180 aa22.09■■□□□ 1.13
C9orf3-208ENST00000451893 K7ERQ8 282 aa22.09■■□□□ 1.13
C9orf3-208ENST00000451893 PCDHGA12O60330 932 aa22.09■■□□□ 1.13
C9orf3-208ENST00000451893 MT-CO1P00395 513 aa22.09■■□□□ 1.13
C9orf3-208ENST00000451893 KCNT1Q5JUK3 1230 aa22.09■■□□□ 1.13
C9orf3-208ENST00000451893 PRAMEF14Q5SWL7 426 aa22.09■■□□□ 1.13
C9orf3-208ENST00000451893 TRNP1Q6NT89 227 aa22.09■■□□□ 1.13
C9orf3-208ENST00000451893 RYBPQ8N488 228 aaPredicted RBP22.09■■□□□ 1.13
C9orf3-208ENST00000451893 GATA6Q92908 595 aa22.09■■□□□ 1.13
C9orf3-208ENST00000451893 ORAI3Q9BRQ5 295 aa22.09■■□□□ 1.13
C9orf3-208ENST00000451893 DESI2Q9BSY9 194 aa22.09■■□□□ 1.13
C9orf3-208ENST00000451893 EBF2Q9HAK2 575 aa22.09■■□□□ 1.13
C9orf3-208ENST00000451893 PREBQ9HCU5 417 aa22.09■■□□□ 1.13
C9orf3-208ENST00000451893 OR12D3Q9UGF7 316 aa22.09■■□□□ 1.13
C9orf3-208ENST00000451893 IL36AQ9UHA7 158 aa22.09■■□□□ 1.13
C9orf3-208ENST00000451893 DMTF1Q9Y222 760 aa22.09■■□□□ 1.13
C9orf3-208ENST00000451893 BTBD3Q9Y2F9 522 aa22.09■■□□□ 1.13
C9orf3-208ENST00000451893 IGLV3-10A0A075B6K4 115 aa22.08■■□□□ 1.13
C9orf3-208ENST00000451893 USP27XA6NNY8 438 aa22.08■■□□□ 1.13
C9orf3-208ENST00000451893 I6L893 689 aaPredicted RBP22.08■■□□□ 1.13
C9orf3-208ENST00000451893 TLR4O00206 839 aa22.08■■□□□ 1.13
C9orf3-208ENST00000451893 TNFSF14O43557 240 aa22.08■■□□□ 1.13
C9orf3-208ENST00000451893 PCDH8O95206 1070 aa22.08■■□□□ 1.13
C9orf3-208ENST00000451893 PLEKP08567 350 aaPredicted RBP22.08■■□□□ 1.13
C9orf3-208ENST00000451893 GPD1P21695 349 aa22.08■■□□□ 1.13
C9orf3-208ENST00000451893 GNA12Q03113 381 aa22.08■■□□□ 1.13
C9orf3-208ENST00000451893 AGBL4Q5VU57 503 aa22.08■■□□□ 1.13
C9orf3-208ENST00000451893 GATAD2AQ86YP4 633 aa22.08■■□□□ 1.13
C9orf3-208ENST00000451893 ZNF683Q8IZ20 524 aa22.08■■□□□ 1.13
C9orf3-208ENST00000451893 FAM172AQ8WUF8 416 aa22.08■■□□□ 1.13
C9orf3-208ENST00000451893 MYO1AQ9UBC5 1043 aa22.08■■□□□ 1.13
C9orf3-208ENST00000451893 PPARGC1AQ9UBK2 798 aaKnown RBP22.08■■□□□ 1.13
C9orf3-208ENST00000451893 KRT86O43790 486 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 RNGTTO60942 597 aaKnown RBP22.07■■□□□ 1.12
C9orf3-208ENST00000451893 WNT1P04628 370 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 ATXN1LP0C7T5 689 aaKnown RBP22.07■■□□□ 1.12
C9orf3-208ENST00000451893 CHRNB2P17787 502 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 GLDCP23378 1020 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 MAGEA1P43355 309 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 VAV2P52735 878 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 SLC20A2Q08357 652 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 CLEC16AQ2KHT3 1053 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 CCDC14Q49A88 953 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 DNAJC24Q6P3W2 148 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 SCYL2Q6P3W7 929 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 STRADAQ7RTN6 431 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 ZNF571Q7Z3V5 609 aaPredicted RBP22.07■■□□□ 1.12
C9orf3-208ENST00000451893 KIAA1328Q86T90 577 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 SLCO6A1Q86UG4 719 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 TRIM69Q86WT6 500 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 MFSD2AQ8NA29 543 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 KDF1Q8NAX2 398 aaPredicted RBP22.07■■□□□ 1.12
C9orf3-208ENST00000451893 ACRBPQ8NEB7 543 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 TMIEQ8NEW7 156 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 OR2A12Q8NGT7 310 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 JOSD2Q8TAC2 188 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 TBC1D31Q96DN5 1066 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 MYOCQ99972 504 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 DNAI1Q9UI46 699 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 PCDHA13Q9Y5I0 950 aa22.07■■□□□ 1.12
C9orf3-208ENST00000451893 PRAMEF26H0Y7S4 382 aa22.06■■□□□ 1.12
C9orf3-208ENST00000451893 SMAD6O43541 496 aaKnown RBP22.06■■□□□ 1.12
C9orf3-208ENST00000451893 LATO43561 262 aa22.06■■□□□ 1.12
C9orf3-208ENST00000451893 GJB6O95452 261 aa22.06■■□□□ 1.12
C9orf3-208ENST00000451893 ADRA1BP35368 520 aa22.06■■□□□ 1.12
C9orf3-208ENST00000451893 PTPN9P43378 593 aa22.06■■□□□ 1.12
C9orf3-208ENST00000451893 MAPKAPK2P49137 400 aa22.06■■□□□ 1.12
C9orf3-208ENST00000451893 SERPINH1P50454 418 aaKnown RBP22.06■■□□□ 1.12
C9orf3-208ENST00000451893 GEMIN4P57678 1058 aaKnown RBP22.06■■□□□ 1.12
C9orf3-208ENST00000451893 KIF5AQ12840 1032 aa22.06■■□□□ 1.12
C9orf3-208ENST00000451893 ARSIQ5FYB1 569 aa22.06■■□□□ 1.12
C9orf3-208ENST00000451893 DBX2Q6ZNG2 339 aa22.06■■□□□ 1.12
C9orf3-208ENST00000451893 GALNT15Q8N3T1 639 aa22.06■■□□□ 1.12
C9orf3-208ENST00000451893 PCDH20Q8N6Y1 951 aaKnown RBP22.06■■□□□ 1.12
C9orf3-208ENST00000451893 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.06■■□□□ 1.12
C9orf3-208ENST00000451893 CEP44Q9C0F1 390 aa22.06■■□□□ 1.12
C9orf3-208ENST00000451893 INTUQ9ULD6 942 aa22.06■■□□□ 1.12
C9orf3-208ENST00000451893 REXO2Q9Y3B8 237 aaKnown RBP22.06■■□□□ 1.12
C9orf3-208ENST00000451893 CEP295Q9C0D2 2601 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 C2CD4BA6NLJ0 364 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 SLC31A1O15431 190 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 PJA2O43164 708 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 CTSLP07711 333 aa22.05■■□□□ 1.12
C9orf3-208ENST00000451893 UNGP13051 313 aaPredicted RBP22.05■■□□□ 1.12
C9orf3-208ENST00000451893 TNNT1P13805 278 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms