RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 FAM114A2Q9NRY5 505 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 HAUS2Q9NVX0 235 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 ELOVL2Q9NXB9 296 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 UBP1Q9NZI7 540 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 PRKAG3Q9UGI9 489 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 ERVW-1Q9UQF0 538 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 ATP8A1Q9Y2Q0 1164 aa14.87□□□□□ -0.03
TNF-208ENST00000449264 MUC22E2RYF6 1773 aaPredicted RBP14.86□□□□□ -0.03
TNF-208ENST00000449264 BNIP3LO60238 219 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 ATP5BP06576 529 aaKnown RBP14.86□□□□□ -0.03
TNF-208ENST00000449264 APRTP07741 180 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 IVDP26440 423 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 FDFT1P37268 417 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 GRIA2P42262 883 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 RGRP47804 291 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 LMAN1P49257 510 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 ITGA8P53708 1063 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 PFKPQ01813 784 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 DSC2Q02487 901 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 EIF4HQ15056 248 aaKnown RBP14.86□□□□□ -0.03
TNF-208ENST00000449264 PARP6Q2NL67 630 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 ACCSLQ4AC99 568 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 PREPLQ4J6C6 727 aaPredicted RBP14.86□□□□□ -0.03
TNF-208ENST00000449264 INO80DQ53TQ3 878 aaPredicted RBP14.86□□□□□ -0.03
TNF-208ENST00000449264 IER5LQ5T953 404 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 SH2D3CQ8N5H7 860 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 SPATA22Q8NHS9 363 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 CPT1BQ92523 772 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 SEMA3CQ99985 751 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 MGME1Q9BQP7 344 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 TNKS2Q9H2K2 1166 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 FBRSL1Q9HCM7 1045 aaKnown RBP14.86□□□□□ -0.03
TNF-208ENST00000449264 GRHL1Q9NZI5 618 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 SLCO3A1Q9UIG8 710 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 TPX2Q9ULW0 747 aaKnown RBP14.86□□□□□ -0.03
TNF-208ENST00000449264 HS3ST2Q9Y278 367 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 TRIOO75962 3097 aa14.86□□□□□ -0.03
TNF-208ENST00000449264 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.85□□□□□ -0.03
TNF-208ENST00000449264 ASLP04424 464 aa14.85□□□□□ -0.03
TNF-208ENST00000449264 DLDP09622 509 aaKnown RBP14.85□□□□□ -0.03
TNF-208ENST00000449264 CD86P42081 329 aa14.85□□□□□ -0.03
TNF-208ENST00000449264 CARSP49589 748 aaKnown RBP14.85□□□□□ -0.03
TNF-208ENST00000449264 GALK1P51570 392 aa14.85□□□□□ -0.03
TNF-208ENST00000449264 PLTPP55058 493 aa14.85□□□□□ -0.03
TNF-208ENST00000449264 VSNL1P62760 191 aa14.85□□□□□ -0.03
TNF-208ENST00000449264 SLC20A2Q08357 652 aa14.85□□□□□ -0.03
TNF-208ENST00000449264 PRPSAP1Q14558 356 aa14.85□□□□□ -0.03
TNF-208ENST00000449264 PON2Q15165 354 aa14.85□□□□□ -0.03
TNF-208ENST00000449264 ATXN7L2Q5T6C5 722 aaPredicted RBP14.85□□□□□ -0.03
TNF-208ENST00000449264 ANKRD22Q5VYY1 191 aa14.85□□□□□ -0.03
TNF-208ENST00000449264 C22orf39Q6P5X5 142 aa14.85□□□□□ -0.03
TNF-208ENST00000449264 SEC14L1Q92503 715 aa14.85□□□□□ -0.03
TNF-208ENST00000449264 RBM15Q96T37 977 aaKnown RBP eCLIP14.85□□□□□ -0.03
TNF-208ENST00000449264 GORASP1Q9BQQ3 440 aa14.85□□□□□ -0.03
TNF-208ENST00000449264 PARD6BQ9BYG5 372 aa14.85□□□□□ -0.03
TNF-208ENST00000449264 C8orf33Q9H7E9 229 aaPredicted RBP14.85□□□□□ -0.03
TNF-208ENST00000449264 ZDHHC4Q9NPG8 344 aa14.85□□□□□ -0.03
TNF-208ENST00000449264 WHRNQ9P202 907 aa14.85□□□□□ -0.03
TNF-208ENST00000449264 LHX3Q9UBR4 397 aa14.85□□□□□ -0.03
TNF-208ENST00000449264 ANAPC5Q9UJX4 755 aa14.85□□□□□ -0.03
TNF-208ENST00000449264 TCRBV7S3A2A0A539 114 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 BHMG1C9JSJ3 638 aaPredicted RBP14.84□□□□□ -0.03
TNF-208ENST00000449264 GOLGA8MH3BSY2 632 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 MT-CYBP00156 380 aaPredicted RBP14.84□□□□□ -0.03
TNF-208ENST00000449264 HSPA9P38646 679 aaKnown RBP14.84□□□□□ -0.03
TNF-208ENST00000449264 NNMTP40261 264 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 SCNN1BP51168 640 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 ST8SIA6P61647 398 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 NIPAL4Q0D2K0 466 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 SEMA5AQ13591 1074 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 CUL1Q13616 776 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 DLG2Q15700 870 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 PTPRNQ16849 979 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 FNDC3BQ53EP0 1204 aaKnown RBP14.84□□□□□ -0.03
TNF-208ENST00000449264 RNASEH2BQ5TBB1 312 aaKnown RBP14.84□□□□□ -0.03
TNF-208ENST00000449264 NUDT18Q6ZVK8 323 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 METTL3Q86U44 580 aaKnown RBP14.84□□□□□ -0.03
TNF-208ENST00000449264 RALGPS2Q86X27 583 aaPredicted RBP14.84□□□□□ -0.03
TNF-208ENST00000449264 PPIL6Q8IXY8 311 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 RYBPQ8N488 228 aaPredicted RBP14.84□□□□□ -0.03
TNF-208ENST00000449264 ZNF366Q8N895 744 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 PDCD7Q8N8D1 485 aaKnown RBP14.84□□□□□ -0.03
TNF-208ENST00000449264 BBOF1Q8ND07 529 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 OR6K2Q8NGY2 324 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 UCMAQ8WVF2 138 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 OXNAD1Q96HP4 312 aaPredicted RBP14.84□□□□□ -0.03
TNF-208ENST00000449264 MRGPRX3Q96LB0 322 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 FCRL5Q96RD9 977 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 MLPHQ9BV36 600 aaPredicted RBP14.84□□□□□ -0.03
TNF-208ENST00000449264 SLC25A51Q9H1U9 297 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 NEUROG2Q9H2A3 272 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 SCUBE2Q9NQ36 999 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 SLC2A4RGQ9NR83 387 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 NFU1Q9UMS0 254 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 DUSP12Q9UNI6 340 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 PLA2G4CQ9UP65 541 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 VCANP13611 3396 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 ANTXRLA6NF34 631 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 TTC34A8MYJ7 566 aa14.84□□□□□ -0.03
TNF-208ENST00000449264 PMPCBO75439 489 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms