RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TBC1D3HP0C7X1 549 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 MZF1P28698 734 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 RXRGP48443 463 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 PSMD8P48556 350 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 ADPRHP54922 357 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 IL9RQ01113 521 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 OVGP1Q12889 678 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 CAMK2BQ13554 666 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 C15orf59Q2T9L4 293 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 OTUD1Q5VV17 481 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 TBC1D3GQ6DHY5 549 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 TBC1D3CQ6IPX1 549 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 DCUN1D2Q6PH85 259 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 PDZD3Q86UT5 571 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 IQCHQ86VS3 1027 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 ZDHHC17Q8IUH5 632 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 REXO1L1PQ8IX06 675 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 TBC1D3Q8IZP1 549 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 CCAR2Q8N163 923 aaKnown RBP14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 AADATQ8N5Z0 425 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 MFSD2AQ8NA29 543 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 ZNF564Q8TBZ8 553 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 SAP25Q8TEE9 199 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 RXFP2Q8WXD0 754 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 RFFLQ8WZ73 363 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 RNF34Q969K3 372 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 SERAC1Q96JX3 654 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 CFAP57Q96MR6 1250 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 SLC2A13Q96QE2 648 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 PRMT1Q99873 361 aaKnown RBP14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 GOLPH3Q9H4A6 298 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 LZTFL1Q9NQ48 299 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 PARVAQ9NVD7 372 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 ANAPC7Q9UJX3 599 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 RAXQ9Y2V3 346 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 PLXNA2O75051 1894 aa14.08□□□□□ -0.16
PDLIM2-213ENST00000448520 DOCK9Q9BZ29 2069 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 COL5A1P20908 1838 aaPredicted RBP14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 TMEM191CA6NGB0 347 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 C2CD4BA6NLJ0 364 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 LATO43561 262 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 JUPP14923 745 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 PDGFRAP16234 1089 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 GPD1P21695 349 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 SCNN1AP37088 669 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 NOP2P46087 812 aaKnown RBP14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 ATP11AP98196 1134 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 CCDC15Q0P6D6 951 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 ACAP1Q15027 740 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 COL28A1Q2UY09 1125 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 CCDC157Q569K6 752 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 PRAMEF14Q5SWL7 426 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 DHRS13Q6UX07 377 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 GATAD2AQ86YP4 633 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 FRS2Q8WU20 508 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 HNRNPLLQ8WVV9 542 aaKnown RBP14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 OR8D1Q8WZ84 308 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 FAM131CQ96AQ9 280 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 TRIM44Q96DX7 344 aaPredicted RBP14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 CNDP2Q96KP4 475 aaKnown RBP14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 TBCBQ99426 244 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 FAM204AQ9H8W3 233 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 LUC7LQ9NQ29 371 aaKnown RBP14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 TMEM51Q9NW97 253 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 DDIT4Q9NX09 232 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 GUCA1BQ9UMX6 200 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 DMTF1Q9Y222 760 aa14.07□□□□□ -0.16
PDLIM2-213ENST00000448520 TP53BP1Q12888 1972 aaPredicted RBP14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 SYNJ2BP-COX16A0A087WUM0 186 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 ALOX15BO15296 676 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 CCP110O43303 1012 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 ATP9BO43861 1147 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 DRD3P35462 400 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 HNF1BP35680 557 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 STK19P49842 368 aaPredicted RBP14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 SULT1E1P49888 294 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 KIF5AQ12840 1032 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 ZNF177Q13360 481 aaPredicted RBP14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 SHBQ15464 509 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 CDO1Q16878 200 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 CCDC14Q49A88 953 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 ACCSLQ4AC99 568 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 NAPEPLDQ6IQ20 393 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 FBXL22Q6P050 247 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 NPY6RQ99463 290 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 FEM1AQ9BSK4 669 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 MRPL47Q9HD33 250 aaKnown RBP14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 COX16Q9P0S2 106 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 SLC25A13Q9UJS0 675 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 FARP1Q9Y4F1 1045 aaPredicted RBP14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 HYOU1Q9Y4L1 999 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 CAPN6Q9Y6Q1 641 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 SCINQ9Y6U3 715 aa14.06□□□□□ -0.16
PDLIM2-213ENST00000448520 A0A087WV48 116 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 FAM149AA5PLN7 773 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 C1QTNF3-AMACRE9PGA6 284 aa14.05□□□□□ -0.16
PDLIM2-213ENST00000448520 WNT9AO14904 365 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms