RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 OR6B3Q8NGW1 331 aa3.4□□□□□ -1.87
PMS1-215ENST00000447232 NAT6Q93015 286 aa3.4□□□□□ -1.87
PMS1-215ENST00000447232 RNF26Q9BY78 433 aaPredicted RBP3.4□□□□□ -1.87
PMS1-215ENST00000447232 CIPCQ9C0C6 399 aa3.4□□□□□ -1.87
PMS1-215ENST00000447232 WNT10AQ9GZT5 417 aa3.4□□□□□ -1.87
PMS1-215ENST00000447232 TMEM30AQ9NV96 361 aa3.4□□□□□ -1.87
PMS1-215ENST00000447232 TNRC6AQ8NDV7 1962 aaKnown RBP3.39□□□□□ -1.87
PMS1-215ENST00000447232 A0A1W2PQM1 296 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 SLC12A8A0AV02 714 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 FAM92AA1XBS5 289 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 PRSS44E7EML9 344 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 F8VP50 259 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 TPP1O14773 563 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 MUSKO15146 869 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 MID1O15344 667 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 CLDN3O15551 220 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 PRKAR1AP10644 381 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 ANXA13P27216 316 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 UGT1A3P35503 534 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 PEX3P56589 373 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 EXOSC10Q01780 885 aaKnown RBP3.39□□□□□ -1.87
PMS1-215ENST00000447232 STAT4Q14765 748 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 TMEM132DQ14C87 1099 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 CST6Q15828 149 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 DEFB109BQ30KR1 87 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 SV2CQ496J9 727 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 NADK2Q4G0N4 442 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 SV2BQ7L1I2 683 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 TAOK1Q7L7X3 1001 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 CATSPER3Q86XQ3 398 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 SLC22A18ASQ8N1D0 253 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 AADATQ8N5Z0 425 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 GLIS1Q8NBF1 620 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 MYLPFQ96A32 169 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 HDAC11Q96DB2 347 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 TMEM74Q96NL1 305 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 ATP13A1Q9HD20 1204 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 TUFT1Q9NNX1 390 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 CRTAC1Q9NQ79 661 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 GPR27Q9NS67 375 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 IL37Q9NZH6 218 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 MAGEC2Q9UBF1 373 aaPredicted RBP3.39□□□□□ -1.87
PMS1-215ENST00000447232 CYTH4Q9UIA0 394 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 PCDHA12Q9UN75 941 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 CA5BQ9Y2D0 317 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 C2CD2Q9Y426 696 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 RBM8AQ9Y5S9 174 aaKnown RBP3.39□□□□□ -1.87
PMS1-215ENST00000447232 NYNRINQ9P2P1 1898 aaKnown RBP3.39□□□□□ -1.87
PMS1-215ENST00000447232 MAP1AP78559 2803 aaPredicted RBP3.39□□□□□ -1.87
PMS1-215ENST00000447232 KLF18A0A0U1RQI7 1052 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 CCDC196A0A1B0GTZ2 297 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 ARHGEF35A5YM69 484 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 LRRC10BA6NIK2 292 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 CCDC169A6NNP5 214 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 PRAMEF26H0Y7S4 382 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 CCNT1O60563 726 aaKnown RBP3.39□□□□□ -1.87
PMS1-215ENST00000447232 ATP2C2O75185 946 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 MED24O75448 989 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 RNASEH2AO75792 299 aaKnown RBP3.39□□□□□ -1.87
PMS1-215ENST00000447232 GUCY2CP25092 1073 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 YWHAQP27348 245 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 PCSK1P29120 753 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 CDC25AP30304 524 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 CACNA2D1P54289 1103 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 RNASE9P60153 205 aaKnown RBP3.39□□□□□ -1.87
PMS1-215ENST00000447232 HNRNPKP61978 463 aaKnown RBP eCLIP3.39□□□□□ -1.87
PMS1-215ENST00000447232 KCNMB1Q16558 191 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 KYAT1Q16773 422 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 FNDC3BQ53EP0 1204 aaKnown RBP3.39□□□□□ -1.87
PMS1-215ENST00000447232 C22orf34Q6ZV56 151 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 LIMS2Q7Z4I7 341 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 KIAA0907Q7Z7F0 614 aaPredicted RBP3.39□□□□□ -1.87
PMS1-215ENST00000447232 PRPF39Q86UA1 669 aaKnown RBP3.39□□□□□ -1.87
PMS1-215ENST00000447232 TRIM69Q86WT6 500 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 ZC3H3Q8IXZ2 948 aaKnown RBP3.39□□□□□ -1.87
PMS1-215ENST00000447232 SLC35F3Q8IY50 421 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 Q8NA96 180 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 GANCQ8TET4 914 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 CYB5D2Q8WUJ1 264 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 PTPRN2Q92932 1015 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 GFM1Q96RP9 751 aaKnown RBP3.39□□□□□ -1.87
PMS1-215ENST00000447232 NTPCRQ9BSD7 190 aaKnown RBP3.39□□□□□ -1.87
PMS1-215ENST00000447232 SLC2A11Q9BYW1 496 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 DLL4Q9NR61 685 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 C19orf73Q9NVV2 129 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 CHORDC1Q9UHD1 332 aaPredicted RBP3.39□□□□□ -1.87
PMS1-215ENST00000447232 KCND3Q9UK17 655 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 CPSF3Q9UKF6 684 aaKnown RBP3.39□□□□□ -1.87
PMS1-215ENST00000447232 KCTD3Q9Y597 815 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 PCDHGA3Q9Y5H0 932 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 PCDHA5Q9Y5H7 936 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 ST14Q9Y5Y6 855 aa3.39□□□□□ -1.87
PMS1-215ENST00000447232 UNC13CQ8NB66 2214 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 GRID2O43424 1007 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 BAG4O95429 457 aaKnown RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 CSF2P04141 144 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 NME1P15531 152 aaKnown RBP3.38□□□□□ -1.87
PMS1-215ENST00000447232 GOT1P17174 413 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 BPIP17213 487 aa3.38□□□□□ -1.87
PMS1-215ENST00000447232 HLA-FP30511 346 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms