RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 PRLRP16471 622 aa21.15■□□□□ 0.98
SDC1-205ENST00000447124 TNFAIP3P21580 790 aa21.15■□□□□ 0.98
SDC1-205ENST00000447124 GKP32189 559 aa21.15■□□□□ 0.98
SDC1-205ENST00000447124 RECQLP46063 649 aaPredicted RBP21.15■□□□□ 0.98
SDC1-205ENST00000447124 STAT4Q14765 748 aa21.15■□□□□ 0.98
SDC1-205ENST00000447124 ZNF284Q2VY69 593 aa21.15■□□□□ 0.98
SDC1-205ENST00000447124 NEK5Q6P3R8 708 aa21.15■□□□□ 0.98
SDC1-205ENST00000447124 DNAJC24Q6P3W2 148 aa21.15■□□□□ 0.98
SDC1-205ENST00000447124 SCYL2Q6P3W7 929 aa21.15■□□□□ 0.98
SDC1-205ENST00000447124 LEKR1Q6ZMV7 388 aa21.15■□□□□ 0.98
SDC1-205ENST00000447124 HORMAD1Q86X24 394 aa21.15■□□□□ 0.98
SDC1-205ENST00000447124 DNAAF5Q86Y56 855 aa21.15■□□□□ 0.98
SDC1-205ENST00000447124 MARCH9Q86YJ5 346 aa21.15■□□□□ 0.98
SDC1-205ENST00000447124 TMEM145Q8NBT3 493 aa21.15■□□□□ 0.98
SDC1-205ENST00000447124 NAP1L5Q96NT1 182 aaPredicted RBP21.15■□□□□ 0.98
SDC1-205ENST00000447124 NAT10Q9H0A0 1025 aaKnown RBP21.15■□□□□ 0.98
SDC1-205ENST00000447124 MAGEH1Q9H213 219 aa21.15■□□□□ 0.98
SDC1-205ENST00000447124 CHD5Q8TDI0 1954 aa21.15■□□□□ 0.98
SDC1-205ENST00000447124 TMEM8BA6NDV4 472 aa21.14■□□□□ 0.97
SDC1-205ENST00000447124 ITGAVP06756 1048 aa21.14■□□□□ 0.97
SDC1-205ENST00000447124 L1CAMP32004 1257 aa21.14■□□□□ 0.97
SDC1-205ENST00000447124 CCNHP51946 323 aaPredicted RBP21.14■□□□□ 0.97
SDC1-205ENST00000447124 SETMARQ53H47 684 aaPredicted RBP21.14■□□□□ 0.97
SDC1-205ENST00000447124 SEL1L3Q68CR1 1132 aa21.14■□□□□ 0.97
SDC1-205ENST00000447124 CAVIN1Q6NZI2 390 aaKnown RBP21.14■□□□□ 0.97
SDC1-205ENST00000447124 TMPRSS7Q7RTY8 843 aa21.14■□□□□ 0.97
SDC1-205ENST00000447124 KANSL1Q7Z3B3 1105 aa21.14■□□□□ 0.97
SDC1-205ENST00000447124 IQCHQ86VS3 1027 aa21.14■□□□□ 0.97
SDC1-205ENST00000447124 PLPP6Q8IY26 295 aa21.14■□□□□ 0.97
SDC1-205ENST00000447124 ISG20Q96AZ6 181 aaKnown RBP21.14■□□□□ 0.97
SDC1-205ENST00000447124 MCEEQ96PE7 176 aa21.14■□□□□ 0.97
SDC1-205ENST00000447124 MYOCQ99972 504 aa21.14■□□□□ 0.97
SDC1-205ENST00000447124 FUCA2Q9BTY2 467 aa21.14■□□□□ 0.97
SDC1-205ENST00000447124 TM6SF2Q9BZW4 377 aa21.14■□□□□ 0.97
SDC1-205ENST00000447124 KLC2Q9H0B6 622 aa21.14■□□□□ 0.97
SDC1-205ENST00000447124 CAAP1Q9H8G2 361 aa21.14■□□□□ 0.97
SDC1-205ENST00000447124 DYRK4Q9NR20 520 aa21.14■□□□□ 0.97
SDC1-205ENST00000447124 HECAQ9UBI9 543 aaPredicted RBP21.14■□□□□ 0.97
SDC1-205ENST00000447124 FZD10Q9ULW2 581 aa21.14■□□□□ 0.97
SDC1-205ENST00000447124 DMXL2Q8TDJ6 3036 aa21.14■□□□□ 0.97
SDC1-205ENST00000447124 CXorf51AA0A1B0GTR3 108 aa21.13■□□□□ 0.97
SDC1-205ENST00000447124 SMTNL1A8MU46 457 aa21.13■□□□□ 0.97
SDC1-205ENST00000447124 KDELR3O43731 214 aa21.13■□□□□ 0.97
SDC1-205ENST00000447124 EPHA8P29322 1005 aaPredicted RBP21.13■□□□□ 0.97
SDC1-205ENST00000447124 CCDC15Q0P6D6 951 aa21.13■□□□□ 0.97
SDC1-205ENST00000447124 FGL2Q14314 439 aa21.13■□□□□ 0.97
SDC1-205ENST00000447124 IQCB1Q15051 598 aa21.13■□□□□ 0.97
SDC1-205ENST00000447124 POLD3Q15054 466 aaPredicted RBP21.13■□□□□ 0.97
SDC1-205ENST00000447124 E4F1Q66K89 784 aaPredicted RBP21.13■□□□□ 0.97
SDC1-205ENST00000447124 EID2Q8N6I1 236 aa21.13■□□□□ 0.97
SDC1-205ENST00000447124 NETO2Q8NC67 525 aa21.13■□□□□ 0.97
SDC1-205ENST00000447124 KLHDC7BQ96G42 594 aa21.13■□□□□ 0.97
SDC1-205ENST00000447124 CNPY3Q9BT09 278 aa21.13■□□□□ 0.97
SDC1-205ENST00000447124 FZD3Q9NPG1 666 aa21.13■□□□□ 0.97
SDC1-205ENST00000447124 MYO6Q9UM54 1294 aa21.13■□□□□ 0.97
SDC1-205ENST00000447124 CHD6Q8TD26 2715 aa21.13■□□□□ 0.97
SDC1-205ENST00000447124 PTPRBP23467 1997 aa21.12■□□□□ 0.97
SDC1-205ENST00000447124 LRRC53A6NM62 1247 aa21.12■□□□□ 0.97
SDC1-205ENST00000447124 SRRM3A6NNA2 597 aaPredicted RBP21.12■□□□□ 0.97
SDC1-205ENST00000447124 TMCO5BA8MYB1 307 aa21.12■□□□□ 0.97
SDC1-205ENST00000447124 RAMP2O60895 175 aa21.12■□□□□ 0.97
SDC1-205ENST00000447124 PCDH8O95206 1070 aa21.12■□□□□ 0.97
SDC1-205ENST00000447124 CCDC172P0C7W6 258 aa21.12■□□□□ 0.97
SDC1-205ENST00000447124 ITGB7P26010 798 aa21.12■□□□□ 0.97
SDC1-205ENST00000447124 ETFBP38117 255 aa21.12■□□□□ 0.97
SDC1-205ENST00000447124 OVGP1Q12889 678 aa21.12■□□□□ 0.97
SDC1-205ENST00000447124 MAMLD1Q13495 774 aa21.12■□□□□ 0.97
SDC1-205ENST00000447124 TMEM259Q4ZIN3 620 aa21.12■□□□□ 0.97
SDC1-205ENST00000447124 ARFGAP1Q8N6T3 406 aa21.12■□□□□ 0.97
SDC1-205ENST00000447124 RTL3Q8N8U3 475 aaKnown RBP21.12■□□□□ 0.97
SDC1-205ENST00000447124 OR6K2Q8NGY2 324 aa21.12■□□□□ 0.97
SDC1-205ENST00000447124 ZCCHC14Q8WYQ9 949 aaKnown RBP21.12■□□□□ 0.97
SDC1-205ENST00000447124 FADS3Q9Y5Q0 445 aa21.12■□□□□ 0.97
SDC1-205ENST00000447124 TP53BP1Q12888 1972 aaPredicted RBP21.12■□□□□ 0.97
SDC1-205ENST00000447124 TRPM6Q9BX84 2022 aa21.11■□□□□ 0.97
SDC1-205ENST00000447124 A0A1B0GTH6 734 aa21.11■□□□□ 0.97
SDC1-205ENST00000447124 ADRB3P13945 408 aa21.11■□□□□ 0.97
SDC1-205ENST00000447124 EPHB2P29323 1055 aa21.11■□□□□ 0.97
SDC1-205ENST00000447124 ARRB1P49407 418 aaPredicted RBP21.11■□□□□ 0.97
SDC1-205ENST00000447124 ZNF165P49910 485 aa21.11■□□□□ 0.97
SDC1-205ENST00000447124 NEK3P51956 506 aa21.11■□□□□ 0.97
SDC1-205ENST00000447124 CLDN2P57739 230 aa21.11■□□□□ 0.97
SDC1-205ENST00000447124 CCDC157Q569K6 752 aa21.11■□□□□ 0.97
SDC1-205ENST00000447124 DCUN1D2Q6PH85 259 aa21.11■□□□□ 0.97
SDC1-205ENST00000447124 PARS2Q7L3T8 475 aaKnown RBP21.11■□□□□ 0.97
SDC1-205ENST00000447124 ZNF571Q7Z3V5 609 aaPredicted RBP21.11■□□□□ 0.97
SDC1-205ENST00000447124 VCPIP1Q96JH7 1222 aa21.11■□□□□ 0.97
SDC1-205ENST00000447124 HAUS4Q9H6D7 363 aa21.11■□□□□ 0.97
SDC1-205ENST00000447124 ZDHHC6Q9H6R6 413 aa21.11■□□□□ 0.97
SDC1-205ENST00000447124 AIPL1Q9NZN9 384 aa21.11■□□□□ 0.97
SDC1-205ENST00000447124 FTSJ1Q9UET6 329 aa21.11■□□□□ 0.97
SDC1-205ENST00000447124 WASH4PA8MWX3 477 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 ENC1O14682 589 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 YKT6O15498 198 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 CREB3O43889 395 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 MAGEC1O60732 1142 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 LDOC1O95751 146 aaPredicted RBP21.1■□□□□ 0.97
SDC1-205ENST00000447124 THEGLP0DJG4 465 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 DNAJC3Q13217 504 aa21.1■□□□□ 0.97
SDC1-205ENST00000447124 NR1I3Q14994 352 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms