RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 TIGD5Q53EQ6 642 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 DCAF6Q58WW2 860 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 KIAA0319Q5VV43 1072 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 NANOGP8Q6NSW7 305 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 PRUNE1Q86TP1 453 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 BPHLQ86WA6 291 aaPredicted RBP13.29□□□□□ -0.28
DDX56-206ENST00000446987 NT5DC4Q86YG4 428 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 CHERPQ8IWX8 916 aaKnown RBP13.29□□□□□ -0.28
DDX56-206ENST00000446987 FBXW8Q8N3Y1 598 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 SLC25A41Q8N5S1 370 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 MAFAQ8NHW3 353 aaPredicted RBP13.29□□□□□ -0.28
DDX56-206ENST00000446987 TBC1D15Q8TC07 691 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 C1orf54Q8WWF1 131 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 APOPT1Q96IL0 206 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 MKNK1Q9BUB5 465 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 NSUN3Q9H649 340 aaKnown RBP13.29□□□□□ -0.28
DDX56-206ENST00000446987 MAN1C1Q9NR34 630 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 SEPT3Q9UH03 358 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 CDH22Q9UJ99 828 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 FRMD4BQ9Y2L6 1034 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 IRAK3Q9Y616 596 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 ANKRD34BA5PLL1 514 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 DNALI1O14645 258 aaPredicted RBP13.29□□□□□ -0.28
DDX56-206ENST00000446987 XPOTO43592 962 aaKnown RBP13.29□□□□□ -0.28
DDX56-206ENST00000446987 GLP2RO95838 553 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 FTLP02792 175 aaPredicted RBP13.29□□□□□ -0.28
DDX56-206ENST00000446987 TUBA1BP68363 451 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 KCNC3Q14003 757 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 MESDQ14696 234 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 TRIP13Q15645 432 aaPredicted RBP13.29□□□□□ -0.28
DDX56-206ENST00000446987 KCNJ8Q15842 424 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 CCDC14Q49A88 953 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 ZNF394Q53GI3 561 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 FAAH2Q6GMR7 532 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 TUBA1AQ71U36 451 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 WDR49Q8IV35 697 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 BEST2Q8NFU1 509 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 VN1R2Q8NFZ6 395 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 ISOC1Q96CN7 298 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 CNDP2Q96KP4 475 aaKnown RBP13.29□□□□□ -0.28
DDX56-206ENST00000446987 FAM96AQ9H5X1 160 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 DPP3Q9NY33 737 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 TAS2R14Q9NYV8 317 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 TMEM9Q9P0T7 183 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 CRNNQ9UBG3 495 aaPredicted RBP13.29□□□□□ -0.28
DDX56-206ENST00000446987 APPL1Q9UKG1 709 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 ITM2BQ9Y287 266 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 AP4S1Q9Y587 144 aa13.29□□□□□ -0.28
DDX56-206ENST00000446987 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.28□□□□□ -0.28
DDX56-206ENST00000446987 FAM237BA0A1B0GVD1 139 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 H3BNH8 94 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 PSMC3P17980 439 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 FGFR3P22607 806 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 COPAP53621 1224 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 TFAMQ00059 246 aaKnown RBP13.28□□□□□ -0.28
DDX56-206ENST00000446987 EFTUD2Q15029 972 aaKnown RBP eCLIP13.28□□□□□ -0.287e-7■■■■□ 22.7
DDX56-206ENST00000446987 FAM209AQ5JX71 171 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 C6orf183Q5T699 404 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 DRICH1Q6PGQ1 229 aaPredicted RBP13.28□□□□□ -0.28
DDX56-206ENST00000446987 IYDQ6PHW0 289 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 GPR141Q7Z602 305 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 AMIGO2Q86SJ2 522 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 ZNF354CQ86Y25 554 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 MMAAQ8IVH4 418 aaKnown RBP13.28□□□□□ -0.28
DDX56-206ENST00000446987 CPSF7Q8N684 471 aaKnown RBP13.28□□□□□ -0.28
DDX56-206ENST00000446987 MRPL43Q8N983 215 aaKnown RBP13.28□□□□□ -0.28
DDX56-206ENST00000446987 PDPRQ8NCN5 879 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 OR7G1Q8NGA0 311 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 CCDC127Q96BQ5 260 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 THAP11Q96EK4 314 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 MED30Q96HR3 178 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 SUSD3Q96L08 255 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 CNBD2Q96M20 576 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 MROQ9BYG7 248 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 ENTPD7Q9NQZ7 604 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 SLC8A2Q9UPR5 921 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 SHOC2Q9UQ13 582 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 PRELID1Q9Y255 219 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 C5orf42Q9H799 3197 aa13.28□□□□□ -0.28
DDX56-206ENST00000446987 LINC01565O15544 149 aa13.27□□□□□ -0.28
DDX56-206ENST00000446987 CYP26A1O43174 497 aa13.27□□□□□ -0.28
DDX56-206ENST00000446987 TIMM44O43615 452 aa13.27□□□□□ -0.28
DDX56-206ENST00000446987 IDH3BO43837 385 aa13.27□□□□□ -0.28
DDX56-206ENST00000446987 TADA2AO75478 443 aa13.27□□□□□ -0.28
DDX56-206ENST00000446987 APOEP02649 317 aa13.27□□□□□ -0.28
DDX56-206ENST00000446987 ITGB3P05106 788 aa13.27□□□□□ -0.28
DDX56-206ENST00000446987 POLR2BP30876 1174 aaKnown RBP13.27□□□□□ -0.28
DDX56-206ENST00000446987 GLUD2P49448 558 aa13.27□□□□□ -0.28
DDX56-206ENST00000446987 OASLQ15646 514 aaKnown RBP13.27□□□□□ -0.28
DDX56-206ENST00000446987 CCDC85BQ15834 202 aaPredicted RBP13.27□□□□□ -0.28
DDX56-206ENST00000446987 HP1BP3Q5SSJ5 553 aaPredicted RBP13.27□□□□□ -0.28
DDX56-206ENST00000446987 EGFLAMQ63HQ2 1017 aa13.27□□□□□ -0.28
DDX56-206ENST00000446987 C15orf39Q6ZRI6 1047 aa13.27□□□□□ -0.28
DDX56-206ENST00000446987 LSMEM2Q8N112 164 aa13.27□□□□□ -0.28
DDX56-206ENST00000446987 DLG3Q92796 817 aa13.27□□□□□ -0.28
DDX56-206ENST00000446987 ACSS3Q9H6R3 686 aa13.27□□□□□ -0.28
DDX56-206ENST00000446987 NGRNQ9NPE2 291 aaKnown RBP13.27□□□□□ -0.28
DDX56-206ENST00000446987 PRDM6Q9NQX0 595 aa13.27□□□□□ -0.28
DDX56-206ENST00000446987 PNPLA3Q9NST1 481 aa13.27□□□□□ -0.28
DDX56-206ENST00000446987 APEX2Q9UBZ4 518 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms