RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 SLC2A7Q6PXP3 512 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 SZRD1Q7Z422 152 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 SNX32Q86XE0 403 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 VSIG1Q86XK7 387 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 SCN4BQ8IWT1 228 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 TTC39CQ8N584 583 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 FAM47BQ8NA70 645 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 ETNPPLQ8TBG4 499 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 COQ8BQ96D53 544 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 CALML4Q96GE6 196 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 FEM1CQ96JP0 617 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 HDHD5Q9BXW7 423 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 FRMD8Q9BZ67 464 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 ZHX1Q9UKY1 873 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 ZNF215Q9UL58 517 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 BTBD3Q9Y2F9 522 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 GDAQ9Y2T3 454 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 ZNF711Q9Y462 761 aa4.77□□□□□ -1.65
HMGB1P48-201ENST00000446155 ZNF804BA4D1E1 1349 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 VILLO15195 856 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 TLR2O60603 784 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 PGM3O95394 542 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 CLTBP09497 229 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 UBL4AP11441 157 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 ARSAP15289 507 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 HOXB9P17482 250 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 HOXD9P28356 352 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 RARSP54136 660 aaKnown RBP4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 RPS13P62277 151 aaKnown RBP4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 RHAGQ02094 409 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 SRSF1Q07955 248 aaKnown RBP eCLIP4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 TBL3Q12788 808 aaKnown RBP4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 PTP4A2Q12974 167 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 DCTN2Q13561 401 aaKnown RBP4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 TDGQ13569 410 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 EZH2Q15910 746 aaKnown RBP4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 GPR162Q16538 588 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 SLC9C1Q4G0N8 1177 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 DUSP28Q4G0W2 176 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 CBWD5Q5RIA9 395 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 RPUSD3Q6P087 351 aaKnown RBP4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 MTFR2Q6P444 385 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 FAM57BQ71RH2 274 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 GET4Q7L5D6 327 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 PIP4P1Q86T03 277 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 PRPF39Q86UA1 669 aaKnown RBP4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 TMEM200AQ86VY9 491 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 TEX11Q8IYF3 940 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 SRBD1Q8N5C6 995 aaKnown RBP4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 LSM14AQ8ND56 463 aaKnown RBP4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 ZCCHC10Q8TBK6 192 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 KAT2BQ92831 832 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 CNDP2Q96KP4 475 aaKnown RBP4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 ADAD1Q96M93 576 aaKnown RBP4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 CLPBQ9H078 707 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 TAOK3Q9H2K8 898 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 MUC13Q9H3R2 512 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 STN1Q9H668 368 aaKnown RBP4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 RETREG1Q9H6L5 497 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 VEZTQ9HBM0 779 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 TMEM248Q9NWD8 314 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 ZDHHC7Q9NXF8 308 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 KLQ9UEF7 1012 aa4.76□□□□□ -1.65
HMGB1P48-201ENST00000446155 KDM3AQ9Y4C1 1321 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 TRBV5-3A0A0A0MS03 114 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 A0A0G2JK05 382 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 KCNU1A8MYU2 1149 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 PTGES3LE9PB15 166 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 TULP3O75386 442 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 BEST1O76090 585 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 CCNDBP1O95273 360 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 HSPA4LO95757 839 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 CD63P08962 238 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 WEE2P0C1S8 567 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 NR2F1P10589 423 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 PKMP14618 531 aaKnown RBP4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 TM4SF1P30408 202 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 ACSL1P33121 698 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 NNMTP40261 264 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 HADHAP40939 763 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 MRPS21P82921 87 aaKnown RBP4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 EPS8Q12929 822 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 ALKBH1Q13686 389 aaKnown RBP4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 Q4G0T1 1027 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 GXYLT1Q4G148 440 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 MTX3Q5HYI7 312 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 VWA5B1Q5TIE3 1220 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 ASPHD1Q5U4P2 390 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 DENND1BQ6P3S1 775 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 GALNT13Q8IUC8 556 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 PIGOQ8TEQ8 1089 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 C2CD4CQ8TF44 421 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 IP6K1Q92551 441 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 KAT2AQ92830 837 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 VMP1Q96GC9 406 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 MASTLQ96GX5 879 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 PPP1R10Q96QC0 940 aaKnown RBP4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 ADPGKQ9BRR6 497 aa4.75□□□□□ -1.65
HMGB1P48-201ENST00000446155 INTS2Q9H0H0 1204 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms