RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 MAFKO60675 156 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 PRAMEF11O60813 436 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 RPP40O75818 363 aaKnown RBP17.53■□□□□ 0.4
LIME1-202ENST00000444951 ZMPSTE24O75844 475 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 MT-CO1P00395 513 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 DLDP09622 509 aaKnown RBP17.53■□□□□ 0.4
LIME1-202ENST00000444951 RBP3P10745 1247 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 SDHBP21912 280 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 WASP42768 502 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 TNFRSF4P43489 277 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 ARF5P84085 180 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 SULT2A1Q06520 285 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 IL10RBQ08334 325 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 EIF4HQ15056 248 aaKnown RBP17.53■□□□□ 0.4
LIME1-202ENST00000444951 SF3A2Q15428 464 aaKnown RBP17.53■□□□□ 0.4
LIME1-202ENST00000444951 SIX1Q15475 284 aaPredicted RBP17.53■□□□□ 0.4
LIME1-202ENST00000444951 ACCSLQ4AC99 568 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 EGFLAMQ63HQ2 1017 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 RETSATQ6NUM9 610 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 ATP11CQ8NB49 1132 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 NETO1Q8TDF5 533 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 TFB1MQ8WVM0 346 aaKnown RBP17.53■□□□□ 0.4
LIME1-202ENST00000444951 ACDQ96AP0 544 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 ARRDC1-AS1Q9H2J1 176 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 SMOC1Q9H4F8 434 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 RXFP3Q9NSD7 469 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 UBA2Q9UBT2 640 aaPredicted RBP17.53■□□□□ 0.4
LIME1-202ENST00000444951 SLCO3A1Q9UIG8 710 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 TTC7AQ9ULT0 858 aaPredicted RBP17.53■□□□□ 0.4
LIME1-202ENST00000444951 PLA2G4CQ9UP65 541 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 ACACBO00763 2458 aa17.53■□□□□ 0.4
LIME1-202ENST00000444951 KCNK1O00180 336 aa17.52■□□□□ 0.4
LIME1-202ENST00000444951 PDE2AO00408 941 aaPredicted RBP17.52■□□□□ 0.4
LIME1-202ENST00000444951 TIMM44O43615 452 aa17.52■□□□□ 0.4
LIME1-202ENST00000444951 ASLP04424 464 aa17.52■□□□□ 0.4
LIME1-202ENST00000444951 ST8SIA6P61647 398 aa17.52■□□□□ 0.4
LIME1-202ENST00000444951 CCDC13Q8IYE1 715 aa17.52■□□□□ 0.4
LIME1-202ENST00000444951 ZNF366Q8N895 744 aa17.52■□□□□ 0.4
LIME1-202ENST00000444951 ZNF513Q8N8E2 541 aaPredicted RBP17.52■□□□□ 0.4
LIME1-202ENST00000444951 NSMCE1Q8WV22 266 aa17.52■□□□□ 0.4
LIME1-202ENST00000444951 HDAC11Q96DB2 347 aa17.52■□□□□ 0.4
LIME1-202ENST00000444951 QKIQ96PU8 341 aaKnown RBP eCLIP17.52■□□□□ 0.4
LIME1-202ENST00000444951 ACOX2Q99424 681 aa17.52■□□□□ 0.4
LIME1-202ENST00000444951 CEP41Q9BYV8 373 aa17.52■□□□□ 0.4
LIME1-202ENST00000444951 DNPEPQ9ULA0 475 aa17.52■□□□□ 0.4
LIME1-202ENST00000444951 EPG5Q9HCE0 2579 aa17.52■□□□□ 0.39
LIME1-202ENST00000444951 A0A0A0MRY4 1105 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 CCDC163A0A0D9SF12 145 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 GOLGA6L10A0A0M3HER8 536 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 SMAD6O43541 496 aaKnown RBP17.51■□□□□ 0.39
LIME1-202ENST00000444951 LIASO43766 372 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 BNIP3LO60238 219 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 NEBLO76041 1014 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 EPN2O95208 641 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 CCNCP24863 283 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 RBL1P28749 1068 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 NNMTP40261 264 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 PPIDQ08752 370 aaKnown RBP17.51■□□□□ 0.39
LIME1-202ENST00000444951 ZNF234Q14588 700 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 PTPRNQ16849 979 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 SLC45A4Q5BKX6 768 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 TIGD7Q6NT04 549 aaPredicted RBP17.51■□□□□ 0.39
LIME1-202ENST00000444951 LRRC49Q8IUZ0 686 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 CDKL3Q8IVW4 592 aaPredicted RBP17.51■□□□□ 0.39
LIME1-202ENST00000444951 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.51■□□□□ 0.39
LIME1-202ENST00000444951 PRELID2Q8N945 189 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 CNTNAP3BQ96NU0 1288 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 CNTNAP3Q9BZ76 1288 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 MTG2Q9H4K7 406 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 PDFQ9HBH1 243 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 CACNA2D2Q9NY47 1150 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 CDC23Q9UJX2 597 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 HCN2Q9UL51 889 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 ZNF148Q9UQR1 794 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 FCF1Q9Y324 198 aaKnown RBP17.51■□□□□ 0.39
LIME1-202ENST00000444951 SHROOM3Q8TF72 1996 aa17.51■□□□□ 0.39
LIME1-202ENST00000444951 ABCA7Q8IZY2 2146 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 ZSCAN5CA6NGD5 496 aaPredicted RBP17.5■□□□□ 0.39
LIME1-202ENST00000444951 TTC34A8MYJ7 566 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 HACD1B0YJ81 288 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 WASH3PC4AMC7 463 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 MATN3O15232 486 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 KCNN4O15554 427 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 ATG13O75143 517 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 TMCC1O94876 653 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 KLF8O95600 359 aaPredicted RBP17.5■□□□□ 0.39
LIME1-202ENST00000444951 JCHAINP01591 159 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 SRCP12931 536 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 HLA-EP13747 358 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 VAV1P15498 845 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 KCNJ1P48048 391 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 SERPINH1P50454 418 aaKnown RBP17.5■□□□□ 0.39
LIME1-202ENST00000444951 CLCN6P51797 869 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 GEMIN4P57678 1058 aaKnown RBP17.5■□□□□ 0.39
LIME1-202ENST00000444951 SLC10A7Q0GE19 358 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 XRCC4Q13426 336 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 BYSLQ13895 437 aaKnown RBP17.5■□□□□ 0.39
LIME1-202ENST00000444951 PRKD1Q15139 912 aaPredicted RBP17.5■□□□□ 0.39
LIME1-202ENST00000444951 CCNG2Q16589 344 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 KCTD19Q17RG1 926 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms