RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 CDK5RAP1Q96SZ6 601 aaKnown RBP13.88□□□□□ -0.19
RBM39-216ENST00000444878 TTLL2Q9BWV7 592 aa13.88□□□□□ -0.19
RBM39-216ENST00000444878 NACA2Q9H009 215 aa13.88□□□□□ -0.19
RBM39-216ENST00000444878 TMEM216Q9P0N5 145 aa13.88□□□□□ -0.19
RBM39-216ENST00000444878 TCAF1Q9Y4C2 921 aa13.88□□□□□ -0.19
RBM39-216ENST00000444878 BPTFQ12830 3046 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 A0A096LPK6 155 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 E2F8A0AVK6 867 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 SNNO75324 88 aaPredicted RBP13.87□□□□□ -0.19
RBM39-216ENST00000444878 GSRP00390 522 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 MPOP05164 745 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 MYL2P10916 166 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 ATP5C1P36542 298 aaKnown RBP13.87□□□□□ -0.19
RBM39-216ENST00000444878 MAXP61244 160 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 ELF3P78545 371 aaPredicted RBP13.87□□□□□ -0.19
RBM39-216ENST00000444878 TLE2Q04725 743 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 SPDYAQ5MJ70 313 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 CES4AQ5XG92 561 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 RINLQ6ZS11 566 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 CIR1Q86X95 450 aaPredicted RBP13.87□□□□□ -0.19
RBM39-216ENST00000444878 ARID3BQ8IVW6 561 aaPredicted RBP13.87□□□□□ -0.19
RBM39-216ENST00000444878 IMP4Q96G21 291 aaKnown RBP13.87□□□□□ -0.19
RBM39-216ENST00000444878 ZNF512Q96ME7 567 aaPredicted RBP13.87□□□□□ -0.19
RBM39-216ENST00000444878 ZNF395Q9H8N7 513 aaPredicted RBP13.87□□□□□ -0.19
RBM39-216ENST00000444878 MRM3Q9HC36 420 aaKnown RBP13.87□□□□□ -0.19
RBM39-216ENST00000444878 ARHGEF3Q9NR81 526 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 THAP1Q9NVV9 213 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 DNMT3LQ9UJW3 386 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 TRIM33Q9UPN9 1127 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 HBS1LQ9Y450 684 aaKnown RBP13.87□□□□□ -0.19
RBM39-216ENST00000444878 F5H5T6 163 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 VAPBO95292 243 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 PROCP04070 461 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 PAMP19021 973 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 TACR2P21452 398 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 HADHAP40939 763 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 CD86P42081 329 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 CHRNA4P43681 627 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 KCNQ1P51787 676 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 IKBKEQ14164 716 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 UGP2Q16851 508 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 PARP15Q460N3 678 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 CCDC153Q494R4 210 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 MBLAC2Q68D91 279 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 NADSYN1Q6IA69 706 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 ESRP1Q6NXG1 681 aaKnown RBP13.87□□□□□ -0.19
RBM39-216ENST00000444878 CLNKQ7Z7G1 428 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 PARP9Q8IXQ6 854 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 IGSF21Q96ID5 467 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 CEP295NLQ96MC4 621 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 CAB39LQ9H9S4 337 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 VPS45Q9NRW7 570 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 ZNF358Q9NW07 568 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 ZNF212Q9UDV6 495 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 HAO1Q9UJM8 370 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 BACE2Q9Y5Z0 518 aa13.87□□□□□ -0.19
RBM39-216ENST00000444878 ANAPC1Q9H1A4 1944 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 KITP10721 976 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 TCF3P15923 654 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 SERPINB3P29508 390 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 GMPRP36959 345 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 MAPKAPK2P49137 400 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 YBEYP58557 167 aaPredicted RBP13.86□□□□□ -0.19
RBM39-216ENST00000444878 SEPT6Q14141 434 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 PCLAFQ15004 111 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 CNGA3Q16281 694 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 TRIM60Q495X7 471 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 SPOUT1Q5T280 376 aaKnown RBP13.86□□□□□ -0.19
RBM39-216ENST00000444878 KDELC1Q6UW63 502 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 PLD6Q8N2A8 252 aaKnown RBP13.86□□□□□ -0.19
RBM39-216ENST00000444878 SLC25A41Q8N5S1 370 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 PDZD8Q8NEN9 1154 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 MCMBPQ9BTE3 642 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 C20orf27Q9GZN8 174 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 RHOJQ9H4E5 214 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 CWH43Q9H720 699 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 KCNK4Q9NYG8 393 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 COPG2Q9UBF2 871 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 MARCOQ9UEW3 520 aaPredicted RBP13.86□□□□□ -0.19
RBM39-216ENST00000444878 SLC39A10Q9ULF5 831 aa13.86□□□□□ -0.19
RBM39-216ENST00000444878 MGRN1O60291 552 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 CBX6O95503 412 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 EFEMP2O95967 443 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 C2P06681 752 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 FGF3P11487 239 aaPredicted RBP13.85□□□□□ -0.19
RBM39-216ENST00000444878 HARS2P49590 506 aaKnown RBP13.85□□□□□ -0.19
RBM39-216ENST00000444878 RASSF2P50749 326 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 DSC2Q02487 901 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 IL10RBQ08334 325 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 SERINC3Q13530 473 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 THOC5Q13769 683 aaKnown RBP13.85□□□□□ -0.19
RBM39-216ENST00000444878 GRM3Q14832 879 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 DLG2Q15700 870 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 RAPH1Q70E73 1250 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 ZC3HC1Q86WB0 502 aaKnown RBP13.85□□□□□ -0.19
RBM39-216ENST00000444878 C10orf107Q8IVU9 208 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 LGI2Q8N0V4 545 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 TEX26Q8N6G2 289 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 SKA1Q96BD8 255 aa13.85□□□□□ -0.19
RBM39-216ENST00000444878 TOX2Q96NM4 488 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms