RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 HEPHQ9BQS7 1158 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 ZDHHC6Q9H6R6 413 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 PDFQ9HBH1 243 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 VPS45Q9NRW7 570 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 SEMA4GQ9NTN9 838 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 DDX56Q9NY93 547 aaKnown RBP17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 HECAQ9UBI9 543 aaPredicted RBP17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 SARDHQ9UL12 918 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 MFHAS1Q9Y4C4 1052 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 HYOU1Q9Y4L1 999 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 ALG6Q9Y672 507 aa17.76■□□□□ 0.43
SMARCAL1-209ENST00000444508 RCCD1A6NED2 376 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 LRRC72A6NJI9 287 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 BTNL10A8MVZ5 291 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 J3KR12 359 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 KPNA3O00505 521 aaPredicted RBP17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 FOXD2O60548 495 aaPredicted RBP17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 IGSF6O95976 241 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 KRT1P04264 644 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 CTSLP07711 333 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 IL10RBQ08334 325 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 CCDC15Q0P6D6 951 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 CSRP2Q16527 193 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 POM121L1PQ3SYA9 428 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 DAAM2Q86T65 1068 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 SLC41A1Q8IVJ1 513 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 RGL4Q8IZJ4 473 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 CCDC112Q8NEF3 446 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 PCDH19Q8TAB3 1148 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 RAPGEF5Q92565 580 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 DESI2Q9BSY9 194 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 NEUROG2Q9H2A3 272 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 SERGEFQ9UGK8 458 aa17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 IPO11Q9UI26 975 aaKnown RBP17.75■□□□□ 0.43
SMARCAL1-209ENST00000444508 KRIT1O00522 736 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 PJA2O43164 708 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 PSTPIP1O43586 416 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 LEFTY1O75610 366 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 ITPKAP23677 461 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 DRD3P35462 400 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 RAD51Q06609 339 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 KIF5AQ12840 1032 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 CNTN1Q12860 1018 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 CCDC6Q16204 474 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 ARSIQ5FYB1 569 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 ARHGAP36Q6ZRI8 547 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 VSIG1Q86XK7 387 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 SYT12Q8IV01 421 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 KIAA2013Q8IYS2 634 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 ATPAF2Q8N5M1 289 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 OR6K2Q8NGY2 324 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 OR14C36Q8NHC7 312 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 TPCN2Q8NHX9 752 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 FAF2Q96CS3 445 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 LRIG1Q96JA1 1093 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 LACRTQ9GZZ8 138 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 PARD6AQ9NPB6 346 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 WASF2Q9Y6W5 498 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 TNRC6BQ9UPQ9 1833 aaKnown RBP17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 NUMA1Q14980 2115 aa17.74■□□□□ 0.43
SMARCAL1-209ENST00000444508 ATXN2Q99700 1313 aaKnown RBP17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 FAM47DPA6NHR8 397 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 METTL12A8MUP2 240 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 ZNF487B1APH4 448 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 PLK4O00444 970 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 SLC7A4O43246 635 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 NRDCO43847 1150 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 PALMO75781 387 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 POP4O95707 220 aaKnown RBP17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 ZNF806P0C7X5 589 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 HOXD12P35452 270 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 METAP1P53582 386 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 RFTN1Q14699 578 aaPredicted RBP17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 IFI16Q16666 785 aaKnown RBP17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 MYLK3Q32MK0 819 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 PLA2G2CQ5R387 149 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 ATXN7L2Q5T6C5 722 aaPredicted RBP17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 DCAF12L1Q5VU92 463 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 NCBP2-AS2Q69YL0 99 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 RABEPKQ7Z6M1 372 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 LRRC49Q8IUZ0 686 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 TP53INP2Q8IXH6 220 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 C12orf50Q8NA57 414 aaPredicted RBP17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 OR2T34Q8NGX1 318 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 NSMCE1Q8WV22 266 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 SNX19Q92543 992 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 ZNF599Q96NL3 588 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 CINPQ9BW66 212 aaPredicted RBP17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 MAK16Q9BXY0 300 aaKnown RBP17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 GOLPH3Q9H4A6 298 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 C6orf106Q9H6K1 298 aaPredicted RBP17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 SUSD2Q9UGT4 822 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 SALL4Q9UJQ4 1053 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 PILRBQ9UKJ0 227 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 DUSP10Q9Y6W6 482 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 GON4LQ3T8J9 2241 aa17.73■□□□□ 0.43
SMARCAL1-209ENST00000444508 ARHGAP6O43182 974 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms