RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 MYO6Q9UM54 1294 aa11.09□□□□□ -0.63
SF3A1-203ENST00000444440 A0A1B0GTQ1 180 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 SLC7A4O43246 635 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 SPINT1O43278 529 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 CREB3O43889 395 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 RNGTTO60942 597 aaKnown RBP11.08□□□□□ -0.64
SF3A1-203ENST00000444440 SERPINC1P01008 464 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 ATXN1LP0C7T5 689 aaKnown RBP11.08□□□□□ -0.64
SF3A1-203ENST00000444440 PRLRP16471 622 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 L1CAMP32004 1257 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 MAPKAPK2P49137 400 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 CCT8P50990 548 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 DNA2P51530 1060 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 CLCN6P51797 869 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 SFSWAPQ12872 951 aaKnown RBP11.08□□□□□ -0.64
SF3A1-203ENST00000444440 FGL2Q14314 439 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 ST3GAL2Q16842 350 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 ZNF284Q2VY69 593 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 ZSCAN23Q3MJ62 389 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 ARL13BQ3SXY8 428 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 FAM46CQ5VWP2 391 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 HGSNATQ68CP4 663 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 SEL1L3Q68CR1 1132 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 NAPEPLDQ6IQ20 393 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 LRSAM1Q6UWE0 723 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 UNQ6494/PRO21346Q6UXR6 183 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 KDM7AQ6ZMT4 941 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 PARS2Q7L3T8 475 aaKnown RBP11.08□□□□□ -0.64
SF3A1-203ENST00000444440 KANSL1Q7Z3B3 1105 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 TMC6Q7Z403 805 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 GLRX5Q86SX6 157 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 MARCH9Q86YJ5 346 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 PCDH20Q8N6Y1 951 aaKnown RBP11.08□□□□□ -0.64
SF3A1-203ENST00000444440 RTL3Q8N8U3 475 aaKnown RBP11.08□□□□□ -0.64
SF3A1-203ENST00000444440 RHBDD1Q8TEB9 315 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 HMCESQ96FZ2 354 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 CNPY3Q9BT09 278 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 ZDHHC6Q9H6R6 413 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 TMEM51Q9NW97 253 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 GGT7Q9UJ14 662 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 PCDHGB2Q9Y5G2 931 aa11.08□□□□□ -0.64
SF3A1-203ENST00000444440 A0A1W2PQU0 124 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 FLRT2O43155 660 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 PCDHGA12O60330 932 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 RAMP2O60895 175 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 DKK1O94907 266 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 FTLP02792 175 aaPredicted RBP11.07□□□□□ -0.64
SF3A1-203ENST00000444440 PRNPP04156 253 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 TCF4P15884 667 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 EPHB2P29323 1055 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 ABL2P42684 1182 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 C21orf59P57076 290 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 NXPH1P58417 271 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 FANCCQ00597 558 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 BNIP3Q12983 259 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 POLD3Q15054 466 aaPredicted RBP11.07□□□□□ -0.64
SF3A1-203ENST00000444440 CARD16Q5EG05 197 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 EFHC2Q5JST6 749 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 ATXN7L2Q5T6C5 722 aaPredicted RBP11.07□□□□□ -0.64
SF3A1-203ENST00000444440 SFMBT2Q5VUG0 894 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 RETSATQ6NUM9 610 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 ERN2Q76MJ5 926 aaKnown RBP11.07□□□□□ -0.64
SF3A1-203ENST00000444440 PRPF39Q86UA1 669 aaKnown RBP11.07□□□□□ -0.64
SF3A1-203ENST00000444440 TMEM145Q8NBT3 493 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 SAP25Q8TEE9 199 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 ELF4Q99607 663 aaPredicted RBP11.07□□□□□ -0.64
SF3A1-203ENST00000444440 HEPHQ9BQS7 1158 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 SNRNP25Q9BV90 132 aaKnown RBP11.07□□□□□ -0.64
SF3A1-203ENST00000444440 CEP44Q9C0F1 390 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 MAGEH1Q9H213 219 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 PREBQ9HCU5 417 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 HECAQ9UBI9 543 aaPredicted RBP11.07□□□□□ -0.64
SF3A1-203ENST00000444440 ITM2BQ9Y287 266 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 PCDHB9Q9Y5E1 797 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 LOC400499M0QZD8 3231 aa11.07□□□□□ -0.64
SF3A1-203ENST00000444440 ZFC3H1O60293 1989 aaKnown RBP11.07□□□□□ -0.64
SF3A1-203ENST00000444440 ADAMTS20P59510 1910 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 TMEM191CA6NGB0 347 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 GOLGA8CPA6NN73 597 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 WASH4PA8MWX3 477 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 TLR4O00206 839 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 RAD51BO15315 384 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 SLC31A1O15431 190 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 INSIG1O15503 277 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 KDELR3O43731 214 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 TMCC1O94876 653 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 ADRB3P13945 408 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 PSMA2P25787 234 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 ITGB7P26010 798 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 CLDN2P57739 230 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 SLC20A2Q08357 652 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 KLHL30Q0D2K2 578 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 HNRNPDQ14103 355 aaKnown RBP11.06□□□□□ -0.64
SF3A1-203ENST00000444440 TMEM259Q4ZIN3 620 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 LRRC73Q5JTD7 316 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 DCUN1D2Q6PH85 259 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 GCNT7Q6ZNI0 430 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 HORMAD1Q86X24 394 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 TP53INP2Q8IXH6 220 aa11.06□□□□□ -0.64
SF3A1-203ENST00000444440 MFSD2AQ8NA29 543 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms