RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 PURAQ00577 322 aaKnown RBP11.35□□□□□ -0.59
FN1-211ENST00000443816 HSPA14Q0VDF9 509 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 MSLNQ13421 630 aaPredicted RBP11.35□□□□□ -0.59
FN1-211ENST00000443816 ZNF621Q6ZSS3 439 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 MTMR14Q8NCE2 650 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 PHC3Q8NDX5 983 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 SPPL2AQ8TCT8 520 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 MTFMTQ96DP5 389 aaKnown RBP11.35□□□□□ -0.59
FN1-211ENST00000443816 UGT2B28Q9BY64 529 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 AGXT2Q9BYV1 514 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 RHBGQ9H310 441 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 H3BNH8 94 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 MYL12AP19105 171 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 CCND1P24385 295 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 VAC14Q08AM6 782 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 SYT12Q8IV01 421 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 TCF25Q9BQ70 676 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 TCF7L2Q9NQB0 619 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 F8VP50 259 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 TALDO1P37837 337 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 TSNQ15631 228 aaKnown RBP11.35□□□□□ -0.59
FN1-211ENST00000443816 FAM187BQ17R55 369 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 TMEM26Q6ZUK4 368 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 DUS2Q9NX74 493 aaKnown RBP11.35□□□□□ -0.59
FN1-211ENST00000443816 TBC1D30Q9Y2I9 924 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 RGS5O15539 181 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 SERPINB3P29508 390 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 FPGSQ05932 587 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 KRR1Q13601 381 aaKnown RBP11.35□□□□□ -0.59
FN1-211ENST00000443816 NT5DC1Q5TFE4 455 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 GPR135Q8IZ08 494 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 DSELQ8IZU8 1212 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 SIK3Q9Y2K2 1263 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 NR2E1Q9Y466 385 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 PTPRJQ12913 1337 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 CD3EAPO15446 510 aaKnown RBP11.35□□□□□ -0.59
FN1-211ENST00000443816 KCNH1O95259 989 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 INHAP05111 366 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 HNRNPH2P55795 449 aaKnown RBP11.35□□□□□ -0.59
FN1-211ENST00000443816 BNC1Q01954 994 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 INTS11Q5TA45 600 aaKnown RBP11.35□□□□□ -0.59
FN1-211ENST00000443816 PEX5LQ8IYB4 626 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 C12orf50Q8NA57 414 aaPredicted RBP11.35□□□□□ -0.59
FN1-211ENST00000443816 TIFAQ96CG3 184 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 C19orf60Q96EN9 201 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 EPB41L4BQ9H329 900 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 C11orf49Q9H6J7 331 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 TFR2Q9UP52 801 aa11.35□□□□□ -0.59
FN1-211ENST00000443816 MRPS33Q9Y291 106 aaKnown RBP11.35□□□□□ -0.59
FN1-211ENST00000443816 ANXA6P08133 673 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 ELK3P41970 407 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 MATKP42679 507 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 ELP6Q0PNE2 266 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 RASA2Q15283 850 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 SCUBE1Q8IWY4 988 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 ACTRT2Q8TDY3 377 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 BTN2A3PQ96KV6 586 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 NRDE2Q9H7Z3 1164 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 A0A096LPK6 155 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 GTPBP1O00178 669 aaKnown RBP11.34□□□□□ -0.59
FN1-211ENST00000443816 DNALI1O14645 258 aaPredicted RBP11.34□□□□□ -0.59
FN1-211ENST00000443816 TARSP26639 723 aaKnown RBP11.34□□□□□ -0.59
FN1-211ENST00000443816 S100A3P33764 101 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 ACSM2AQ08AH3 577 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 FASTKQ14296 549 aaKnown RBP11.34□□□□□ -0.59
FN1-211ENST00000443816 CBX2Q14781 532 aaPredicted RBP11.34□□□□□ -0.59
FN1-211ENST00000443816 ACSM2BQ68CK6 577 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 NPAS4Q8IUM7 802 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 RBFAQ8N0V3 343 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 SELENOMQ8WWX9 145 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 PRRG4Q9BZD6 226 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 CDHR5Q9HBB8 845 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 NT5C1B-RDH14C9J2C7 533 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 ANKRD63C9JTQ0 380 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 DSG1Q02413 1049 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 NEK10Q6ZWH5 1172 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 TMEM161BQ8NDZ6 487 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 POLMQ9NP87 494 aaPredicted RBP11.34□□□□□ -0.59
FN1-211ENST00000443816 PHPT1Q9NRX4 125 aaPredicted RBP11.34□□□□□ -0.59
FN1-211ENST00000443816 DDX28Q9NUL7 540 aaKnown RBP11.34□□□□□ -0.59
FN1-211ENST00000443816 DUOX1Q9NRD9 1551 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 HLA-DQA2P01906 255 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 SERPINE1P05121 402 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 PSMB4P28070 264 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 TATDN1Q6P1N9 297 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 R3HCC1LQ7Z5L2 792 aaKnown RBP11.34□□□□□ -0.59
FN1-211ENST00000443816 ARNTL2Q8WYA1 636 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 UPF1Q92900 1129 aaKnown RBP eCLIP11.34□□□□□ -0.594e-14■□□□□ 8.6
FN1-211ENST00000443816 SHDQ96IW2 340 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 ZNF670Q9BS34 389 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 KCNF1Q9H3M0 494 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 POMKQ9H5K3 350 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 ELOVL2Q9NXB9 296 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 DUSP10Q9Y6W6 482 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 LOXHD1Q8IVV2 1947 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 MRC1P22897 1456 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 ARF4P18085 180 aaPredicted RBP11.34□□□□□ -0.59
FN1-211ENST00000443816 AQP5P55064 265 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 CAPSQ13938 189 aa11.34□□□□□ -0.59
FN1-211ENST00000443816 N4BP2L1Q5TBK1 243 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms