RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 SEPT9Q9UHD8 586 aaPredicted RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 ZNF221Q9UK13 617 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 SLC27A5Q9Y2P5 690 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 NDUFAF1Q9Y375 327 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 PSAPP07602 524 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 ENDOUP21128 410 aaKnown RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 YAP1P46937 504 aaKnown RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 ASPSCR1Q9BZE9 553 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 NCKIPSDQ9NZQ3 722 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 A0A0A0MRY4 1105 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 TMEM150BA6NC51 233 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 C9IYK1 514 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 PARNO95453 639 aaKnown RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 ACO1P21399 889 aaKnown RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 OGDHQ02218 1023 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 LIPMQ5VYY2 423 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 CDC42EP5Q6NZY7 148 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 CDAN1Q8IWY9 1227 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 PARP8Q8N3A8 854 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 TTC39CQ8N584 583 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 EMC1Q8N766 993 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 LEMD2Q8NC56 503 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 SPATA13Q96N96 652 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 CGRRF1Q99675 332 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 DOK1Q99704 481 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 CTRCQ99895 268 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 GDAP2Q9NXN4 497 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 SLC4A1P02730 911 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 CHRNGP07510 517 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 ITIH1P19827 911 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 NOMO3P69849 1222 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 TYSND1Q2T9J0 566 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 PITRM1Q5JRX3 1037 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 SPANXN2Q5MJ10 180 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 KIAA0408Q6ZU52 694 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 TMEM102Q8N9M5 508 aaPredicted RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 SLC4A11Q8NBS3 891 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 GMCL1P1Q8NEA9 526 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 YME1L1Q96TA2 773 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 SNX15Q9NRS6 342 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 OAZ3Q9UMX2 235 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 CCRL2O00421 344 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 PRKACBP22694 351 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 RCVRNP35243 200 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 ABCG1P45844 678 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 POU5F1BQ06416 359 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 KCNT2Q6UVM3 1135 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 CYP4V2Q6ZWL3 525 aaPredicted RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 ACDQ96AP0 544 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 MXRA8Q9BRK3 442 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 GPN2Q9H9Y4 310 aaPredicted RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 SURF1Q15526 300 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 FKBP9P1Q75LS8 142 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.08□□□□□ -1.6
HERC1-201ENST00000443617 GMCL1Q96IK5 515 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 GPATCH2LQ9NWQ4 482 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 OXSMQ9NWU1 459 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 SPO11Q9Y5K1 396 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 MYO10Q9HD67 2058 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 MAGEB16A2A368 324 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 BBOX1O75936 387 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 ADRA2BP18089 450 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 CD247P20963 164 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 PLA2G16P53816 162 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 RHDQ02161 417 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 MRPL28Q13084 256 aaKnown RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 ATP6AP1Q15904 470 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 FAM83EQ2M2I3 478 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 MMAAQ8IVH4 418 aaKnown RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 MAGEE2Q8TD90 523 aaPredicted RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 TFAP2BQ92481 460 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 OMA1Q96E52 524 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 RMND5AQ9H871 391 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 AGO4Q9HCK5 861 aaKnown RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 DIABLOQ9NR28 239 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 TMEM216Q9P0N5 145 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 GABBR1Q9UBS5 961 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 AP4E1Q9UPM8 1137 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 RIMS1Q86UR5 1692 aaKnown RBP5.08□□□□□ -1.6
HERC1-201ENST00000443617 RGPD1P0DJD0 1748 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 UGT2B4P06133 528 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 PTPN2P17706 415 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 SDC4P31431 198 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 MPP1Q00013 466 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 VPS26BQ4G0F5 336 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 CPNE9Q8IYJ1 553 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 LRRN4Q8WUT4 740 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 STRA6Q9BX79 667 aa5.08□□□□□ -1.6
HERC1-201ENST00000443617 BCLAF3A2AJT9 711 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 TCAF2A6NFQ2 919 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 MBL2P11226 248 aaPredicted RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 RBL1P28749 1068 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 NUMBP49757 651 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 TUBB3Q13509 450 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 AGAP7PQ5VUJ5 663 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 PPP2R2DQ66LE6 453 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 CCDC81Q6ZN84 652 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 TMEM143Q96AN5 459 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 SEZ6LQ9BYH1 1024 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 NSMCE4AQ9NXX6 385 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms