RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 E4F1Q66K89 784 aaPredicted RBP8.95□□□□□ -0.98
USP6NL-203ENST00000443016 TRNP1Q6NT89 227 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 RETSATQ6NUM9 610 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 WDR59Q6PJI9 974 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 LINGO4Q6UY18 593 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 IRF2BP2Q7Z5L9 587 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 PIP4K2CQ8TBX8 421 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 SLC6A18Q96N87 628 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.95□□□□□ -0.98
USP6NL-203ENST00000443016 BRINP2Q9C0B6 783 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 NHEJ1Q9H9Q4 299 aaPredicted RBP8.95□□□□□ -0.98
USP6NL-203ENST00000443016 ATP13A1Q9HD20 1204 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 DYRK4Q9NR20 520 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 OR12D3Q9UGF7 316 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 SARDHQ9UL12 918 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 HS3ST2Q9Y278 367 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 OR51B4Q9Y5P0 310 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 PCDH15Q96QU1 1955 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 LAMA5O15230 3695 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 PLK4O00444 970 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 CCP110O43303 1012 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 RTN2O75298 545 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 TOP3BO95985 862 aaKnown RBP8.95□□□□□ -0.98
USP6NL-203ENST00000443016 CALB1P05937 261 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 ZNF883P0CG24 379 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 SRCP12931 536 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 TNFAIP3P21580 790 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 MAT2AP31153 395 aaKnown RBP8.95□□□□□ -0.98
USP6NL-203ENST00000443016 EIF4A3P38919 411 aaKnown RBP8.95□□□□□ -0.98
USP6NL-203ENST00000443016 DNA2P51530 1060 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 CCDC15Q0P6D6 951 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 ZNF423Q2M1K9 1284 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 HGSNATQ68CP4 663 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 DCAF4L2Q8NA75 395 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 OR7D4Q8NG98 312 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 SERAC1Q96JX3 654 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 AGPAT1Q99943 283 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 ARHGAP20Q9P2F6 1191 aa8.95□□□□□ -0.98
USP6NL-203ENST00000443016 TPX2Q9ULW0 747 aaKnown RBP8.95□□□□□ -0.98
USP6NL-203ENST00000443016 KMT2BQ9UMN6 2715 aaPredicted RBP8.95□□□□□ -0.98
USP6NL-203ENST00000443016 DSPP15924 2871 aaKnown RBP8.94□□□□□ -0.98
USP6NL-203ENST00000443016 IGLV3-10A0A075B6K4 115 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 ILVBLA1L0T0 632 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 K7ERQ8 282 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 ALOX15BO15296 676 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 FLRT2O43155 660 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 GJB6O95452 261 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 UNGP13051 313 aaPredicted RBP8.94□□□□□ -0.98
USP6NL-203ENST00000443016 DESP17661 470 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 CD38P28907 300 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 ADRA1BP35368 520 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 DRD3P35462 400 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 CCT8P50990 548 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 METAP1P53582 386 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 BNC1Q01954 994 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 CNTN1Q12860 1018 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 CLEC16AQ2KHT3 1053 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 CCDC14Q49A88 953 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 SLC45A4Q5BKX6 768 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 SCYL2Q6P3W7 929 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 PRPF39Q86UA1 669 aaKnown RBP8.94□□□□□ -0.98
USP6NL-203ENST00000443016 ZNF354CQ86Y25 554 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 TMEM139Q8IV31 216 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 ZNF683Q8IZ20 524 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 PNPLA1Q8N8W4 532 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 JOSD2Q8TAC2 188 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 GRIN3AQ8TCU5 1115 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 FAM172AQ8WUF8 416 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 PCDHB18PQ96TA0 734 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 TGIF2Q9GZN2 237 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 PCOLCE2Q9UKZ9 415 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 PPM1HQ9ULR3 514 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 APOBEC2Q9Y235 224 aaKnown RBP8.94□□□□□ -0.98
USP6NL-203ENST00000443016 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.94□□□□□ -0.98
USP6NL-203ENST00000443016 C2CD4BA6NLJ0 364 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 VILLO15195 856 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 SLC7A4O43246 635 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 SMAD6O43541 496 aaKnown RBP8.94□□□□□ -0.98
USP6NL-203ENST00000443016 NDUFA10O95299 355 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 FTH1P19P0C7X4 201 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 CHRNA3P32297 505 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 RFC1P35251 1148 aaPredicted RBP8.94□□□□□ -0.98
USP6NL-203ENST00000443016 PTPN9P43378 593 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 CCR5P51681 352 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 CLCN6P51797 869 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 IL9RQ01113 521 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 PRAMEF14Q5SWL7 426 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 DNAJC24Q6P3W2 148 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 DCUN1D2Q6PH85 259 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 UNQ6494/PRO21346Q6UXR6 183 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 STRADAQ7RTN6 431 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 CHCHD4Q8N4Q1 142 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 C3orf20Q8ND61 904 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 CHP1Q99653 195 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 TNKS2Q9H2K2 1166 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 KCNF1Q9H3M0 494 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 HPCAL4Q9UM19 191 aa8.94□□□□□ -0.98
USP6NL-203ENST00000443016 GOLGA8CPA6NN73 597 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 C1QTNF9BB2RNN3 333 aa8.93□□□□□ -0.98
USP6NL-203ENST00000443016 EIF3CLB5ME19 914 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms