RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 VPS51Q9UID3 782 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 TMEM59LQ9UK28 342 aa7.94□□□□□ -1.14
CD44-211ENST00000442151 CACNA1EQ15878 2313 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 CFAP47Q6ZTR5 3102 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 A0A1W2PQU0 124 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 A6NNZ2 444 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 EIF3CLB5ME19 914 aaKnown RBP7.93□□□□□ -1.14
CD44-211ENST00000442151 NEMP1O14524 444 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 KCNK3O14649 394 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 RRP8O43159 456 aaKnown RBP7.93□□□□□ -1.14
CD44-211ENST00000442151 TSPAN6O43657 245 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 GFPT2O94808 682 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 MBD3O95983 291 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 CYP1A1P04798 512 aaPredicted RBP7.93□□□□□ -1.14
CD44-211ENST00000442151 FERP16591 822 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 MMP8P22894 467 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 ADRA1BP35368 520 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 DNA2P51530 1060 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 YBEYP58557 167 aaPredicted RBP7.93□□□□□ -1.14
CD44-211ENST00000442151 HNRNPKP61978 463 aaKnown RBP eCLIP7.93□□□□□ -1.14
CD44-211ENST00000442151 CENPCQ03188 943 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 ZNF211Q13398 564 aaPredicted RBP7.93□□□□□ -1.14
CD44-211ENST00000442151 RWDD4Q6NW29 188 aaKnown RBP7.93□□□□□ -1.14
CD44-211ENST00000442151 RYBPQ8N488 228 aaPredicted RBP7.93□□□□□ -1.14
CD44-211ENST00000442151 ATL2Q8NHH9 583 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 TPCN2Q8NHX9 752 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 HCAR2Q8TDS4 363 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 RXFP2Q8WXD0 754 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 CPA5Q8WXQ8 436 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 BAP1Q92560 729 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 GRAMD1AQ96CP6 724 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 TBC1D31Q96DN5 1066 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 EIF3CQ99613 913 aaKnown RBP7.93□□□□□ -1.14
CD44-211ENST00000442151 NRSN2Q9GZP1 204 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 SAMSN1Q9NSI8 373 aaKnown RBP7.93□□□□□ -1.14
CD44-211ENST00000442151 TAB2Q9NYJ8 693 aa7.93□□□□□ -1.14
CD44-211ENST00000442151 KMT2BQ9UMN6 2715 aaPredicted RBP7.93□□□□□ -1.14
CD44-211ENST00000442151 TRABD2BA6NFA1 517 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 EIF4E1BA6NMX2 242 aaKnown RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 SMTNL1A8MU46 457 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 C10orf142B7Z368 130 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 FPGTO14772 594 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 RAMP2O60895 175 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 RTN2O75298 545 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 CNTN5O94779 1100 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 GSRP00390 522 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 WNT1P04628 370 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 MMEP08473 750 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 THEGLP0DJG4 465 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 GPD1P21695 349 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 XPAP23025 273 aaPredicted RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 NFKBIAP25963 317 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 ITGB7P26010 798 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 MAT2AP31153 395 aaKnown RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 RABIFP47224 123 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 SERPINH1P50454 418 aaKnown RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 ZNF135P52742 658 aaPredicted RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 GSCP56915 257 aaPredicted RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 DAB2P98082 770 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 MYL5Q02045 173 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 STX1AQ16623 288 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 ALFQ53S48 1182 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 CCDC157Q569K6 752 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 EFHC2Q5JST6 749 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 TMCO4Q5TGY1 634 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 AGBL4Q5VU57 503 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 C22orf39Q6P5X5 142 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 TFAP2DQ7Z6R9 452 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 SLFN11Q7Z7L1 901 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 NOP9Q86U38 636 aaKnown RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 ZNF354CQ86Y25 554 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 LSMEM2Q8N112 164 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 OR2A12Q8NGT7 310 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 EPS8L1Q8TE68 723 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 NTAN1Q96AB6 310 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 VCPIP1Q96JH7 1222 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 LENG8Q96PV6 779 aaPredicted RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 PSMB7Q99436 277 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 SLC17A9Q9BYT1 436 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 METTL5Q9NRN9 209 aaKnown RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 TMEM248Q9NWD8 314 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 ARHGAP20Q9P2F6 1191 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 HECAQ9UBI9 543 aaPredicted RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 MYO6Q9UM54 1294 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 MUC22E2RYF6 1773 aaPredicted RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 SIGLEC16A6NMB1 481 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 TMEM110-MUSTN1A8MSY1 372 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 SLC31A1O15431 190 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 FGF10O15520 208 aaPredicted RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 KDELR3O43731 214 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 SNAP91O60641 907 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 PLEKP08567 350 aaPredicted RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 TNFAIP3P21580 790 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 ACP1P24666 158 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 ACTN2P35609 894 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 COPB1P53618 953 aaKnown RBP7.92□□□□□ -1.14
CD44-211ENST00000442151 TPM4P67936 248 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 ATP11AP98196 1134 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 IL9RQ01113 521 aa7.92□□□□□ -1.14
CD44-211ENST00000442151 APBA1Q02410 837 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms