RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 NEK3P51956 506 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 USP4Q13107 963 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 ZNF235Q14590 738 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 ANGPT1Q15389 498 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 TRIP13Q15645 432 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 SLC45A4Q5BKX6 768 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 FNBP1LQ5T0N5 605 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 ANKRD22Q5VYY1 191 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 TBC1D3GQ6DHY5 549 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 TBC1D3CQ6IPX1 549 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 PMF1Q6P1K2 205 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 TBC1D3Q8IZP1 549 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 BANPQ8N9N5 519 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 KCTD6Q8NC69 237 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 FEZF2Q8TBJ5 459 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 TFAP2BQ92481 460 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 FAM136AQ96C01 138 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 IFT43Q96FT9 208 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 MCEEQ96PE7 176 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 C2orf49Q9BVC5 232 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 TKTL2Q9H0I9 626 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 SLCO1B3Q9NPD5 702 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 CACNA2D2Q9NY47 1150 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 CLIC5Q9NZA1 410 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 SUN2Q9UH99 717 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 SCML2Q9UQR0 700 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 HBS1LQ9Y450 684 aaKnown RBP7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 TCRBV7S3A2A0A539 114 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 RNASEH2AO75792 299 aaKnown RBP7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 GPD1P21695 349 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 CCR2P41597 374 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 SLC6A3Q01959 620 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 MTA1Q13330 715 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 DMC1Q14565 340 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 MORF4L2Q15014 288 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 LLGL1Q15334 1064 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 P3H1Q32P28 736 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 ARHGAP17Q68EM7 881 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 TRNP1Q6NT89 227 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 FAM171BQ6P995 826 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 VITQ6UXI7 678 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 SPOCD1Q6ZMY3 1216 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 TBC1D1Q86TI0 1168 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 C1orf210Q8IVY1 113 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 OVCA2Q8WZ82 227 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 CPT1BQ92523 772 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 GRAMD1AQ96CP6 724 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 CATSPERBQ9H7T0 1116 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 ABCB8Q9NUT2 735 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 PARVAQ9NVD7 372 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 EPS15L1Q9UBC2 864 aa7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.52□□□□□ -1.21
CDC42BPA-208ENST00000442054 TCRBV21S2A2A0A5A6 115 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 ACSL4O60488 711 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 GFRA3O60609 400 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 LILRB3O75022 631 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 TULP3O75386 442 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 GSRP00390 522 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 C1RP00736 705 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 GABRB2P47870 512 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 TUBP50607 506 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 DAOAP59103 153 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 POLNQ7Z5Q5 900 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 IGDCC3Q8IVU1 814 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 ZNF366Q8N895 744 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 CCHCR1Q8TD31 782 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 DQX1Q8TE96 717 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 RXFP2Q8WXD0 754 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 INPP5DQ92835 1189 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 PTPRN2Q92932 1015 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 C9orf72Q96LT7 481 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 CEP295NLQ96MC4 621 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 RBM15Q96T37 977 aaKnown RBP eCLIP7.51□□□□□ -1.212e-6■■■□□ 16.7
CDC42BPA-208ENST00000442054 HEMGNQ9BXL5 484 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 SMOC2Q9H3U7 446 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 MLXIPLQ9NP71 852 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 CD320Q9NPF0 282 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 KIAA1522Q9P206 1035 aaPredicted RBP7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 CCL26Q9Y258 94 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 CHURC1-FNTBB4DL54 471 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 C1QTNF3-AMACRE9PGA6 284 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 DNAJC6O75061 913 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 SMNDC1O75940 238 aaKnown RBP eCLIP7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 RHOBTB1O94844 696 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 F11P03951 625 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 CCND1P24385 295 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 FNTBP49356 437 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 C21orf59P57076 290 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 RPL6Q02878 288 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 SGCGQ13326 291 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 CRYMQ14894 314 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 PPP1R7Q15435 360 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 BZW1Q7L1Q6 419 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 LPCAT2Q7L5N7 544 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 OTOAQ7RTW8 1153 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 ALYREFQ86V81 257 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 TMEM25Q86YD3 366 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 RCOR2Q8IZ40 523 aa7.51□□□□□ -1.21
CDC42BPA-208ENST00000442054 KIF2BQ8N4N8 673 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms