RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 PRRT2Q7Z6L0 340 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 IL17RCQ8NAC3 791 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 TDRD5Q8NAT2 981 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 POGLUT1Q8NBL1 392 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 GSDMBQ8TAX9 411 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 C17orf50Q8WW18 174 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 ZKSCAN4Q969J2 545 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 GPR78Q96P69 363 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 ADAM2Q99965 735 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 SRSF8Q9BRL6 282 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 TEX12Q9BXU0 123 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 ERVMER34-1Q9H9K5 563 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 AKIP1Q9NQ31 210 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 SLC35C2Q9NQQ7 365 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 SNTG1Q9NSN8 517 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 NCKIPSDQ9NZQ3 722 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 C6orf203Q9P0P8 240 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 PPP4R1LQ9P1A2 415 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 WDR35Q9P2L0 1181 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 FBXL5Q9UKA1 691 aa4.28□□□□□ -1.72
CDC42BPA-207ENST00000441725 H0Y626 953 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 C1RP00736 705 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 RB1P06400 928 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 QDPRP09417 244 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 ZNF8P17098 575 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 CAPN2P17655 700 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 GSTM2P28161 218 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 NDUFS1P28331 727 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 CIITAP33076 1130 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 ATP6V1E1P36543 226 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 CLK3P49761 638 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 ZNF41P51814 821 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 RRP1P56182 461 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 LMAN2Q12907 356 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 CSTF3Q12996 717 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 NTRK2Q16620 822 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 GSTA3Q16772 222 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 BEAN1Q3B7T3 259 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 RABL6Q3YEC7 729 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 USP51Q70EK9 711 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 TADA2BQ86TJ2 420 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 TMEM200AQ86VY9 491 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 ERC1Q8IUD2 1116 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 LAS2Q8IYD9 372 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 PSPC1Q8WXF1 523 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 HSPH1Q92598 858 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 AKAP1Q92667 903 aaKnown RBP eCLIP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 MMABQ96EY8 250 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 SAT2Q96F10 170 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 RBM18Q96H35 190 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 SNX18Q96RF0 628 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 XAB2Q9HCS7 855 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 RRP7BPQ9NSQ0 103 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 GIMAP4Q9NUV9 329 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 CCNL1Q9UK58 526 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 AMFRQ9UKV5 643 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 BLOC1S6Q9UL45 172 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 PKP3Q9Y446 797 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 TRPV2Q9Y5S1 764 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 SESN1Q9Y6P5 492 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 DUSP10Q9Y6W6 482 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 LINC00854A0A1B0GVQ3 168 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 URADA6NGE7 173 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 EIF3CLB5ME19 914 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 KCNJ18B7U540 433 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 USP12O75317 370 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 KRT10P13645 584 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 EDN2P20800 178 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 THPOP40225 353 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 PRPHP41219 470 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 MSH2P43246 934 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 MAGEA8P43361 318 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 TPTEP56180 551 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 NIPAL4Q0D2K0 466 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 MRPL28Q13084 256 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 COG2Q14746 738 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 TCP11X2Q5H9J9 407 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 TEDDM1Q5T9Z0 273 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 LRCH2Q5VUJ6 765 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 CTR9Q6PD62 1173 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 SLC30A9Q6PML9 568 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 SERPINA13PQ6UXR4 307 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 Q6ZWC4 215 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 MOB3CQ70IA8 216 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 ADGRA1Q86SQ6 560 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 FAM160B2Q86V87 743 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 CEP57L1Q8IYX8 460 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 POMGNT2Q8NAT1 580 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 PRPF31Q8WWY3 499 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 ZNF75CPQ92670 426 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 GTF3C6Q969F1 213 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 PTCD3Q96EY7 689 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 EDC3Q96F86 508 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 FYTTD1Q96QD9 318 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 FANCFQ9NPI8 374 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 ARHGEF3Q9NR81 526 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 SNX15Q9NRS6 342 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 TMEM248Q9NWD8 314 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 FBXL17Q9UF56 701 aa4.27□□□□□ -1.73
CDC42BPA-207ENST00000441725 PCSK1NQ9UHG2 260 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms