RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 TMEM25Q86YD3 366 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 SRRM1Q8IYB3 904 aaKnown RBP6.65□□□□□ -1.34
HDAC6-210ENST00000441703 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.65□□□□□ -1.34
HDAC6-210ENST00000441703 ARL14Q8N4G2 192 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 ZSCAN1Q8NBB4 408 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 ZNF564Q8TBZ8 553 aaPredicted RBP6.65□□□□□ -1.34
HDAC6-210ENST00000441703 FBF1Q8TES7 1133 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 TAF4BQ92750 862 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 BIRC7Q96CA5 298 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 GRAMD1AQ96CP6 724 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 MOCOSQ96EN8 888 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 MS4A14Q96JA4 679 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 SLC6A18Q96N87 628 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 ACBD6Q9BR61 282 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 BBS2Q9BXC9 721 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 TRIM9Q9C026 710 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 RNF38Q9H0F5 515 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 ABCG4Q9H172 646 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 LHX5Q9H2C1 402 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 VCX3BQ9H321 246 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 ZNF768Q9H5H4 540 aaKnown RBP6.65□□□□□ -1.34
HDAC6-210ENST00000441703 ASB7Q9H672 318 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 MAGEF1Q9HAY2 307 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 VCX3AQ9NNX9 186 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 AASDHPPTQ9NRN7 309 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 INTS9Q9NV88 658 aaKnown RBP6.65□□□□□ -1.34
HDAC6-210ENST00000441703 DDX43Q9NXZ2 648 aaKnown RBP6.65□□□□□ -1.34
HDAC6-210ENST00000441703 SMARCAL1Q9NZC9 954 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 CPSF3Q9UKF6 684 aaKnown RBP6.65□□□□□ -1.34
HDAC6-210ENST00000441703 ATXN7L1Q9ULK2 861 aaPredicted RBP6.65□□□□□ -1.34
HDAC6-210ENST00000441703 SATB2Q9UPW6 733 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 SIK3Q9Y2K2 1263 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 ARL2BPQ9Y2Y0 163 aa6.65□□□□□ -1.34
HDAC6-210ENST00000441703 PTPRJQ12913 1337 aa6.65□□□□□ -1.35
HDAC6-210ENST00000441703 FBN3Q75N90 2809 aa6.65□□□□□ -1.35
HDAC6-210ENST00000441703 ICE1Q9Y2F5 2266 aa6.65□□□□□ -1.35
HDAC6-210ENST00000441703 SPTBN1Q01082 2364 aaKnown RBP6.65□□□□□ -1.35
HDAC6-210ENST00000441703 USP9YO00507 2555 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-210ENST00000441703 ESYT3A0FGR9 886 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 ZNF840PA6NDX5 716 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 KPNA7A9QM74 516 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 KLRC4O43908 158 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 KRT16P08779 473 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 IRF1P10914 325 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 TYRP14679 529 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 ACAT1P24752 427 aaKnown RBP6.64□□□□□ -1.35
HDAC6-210ENST00000441703 PCK1P35558 622 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 CASRP41180 1078 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 PNPLA4P41247 253 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 MTIF2P46199 727 aaKnown RBP6.64□□□□□ -1.35
HDAC6-210ENST00000441703 DUSP3P51452 185 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-210ENST00000441703 NCKAP1LP55160 1127 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 ARID5AQ03989 594 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 IFRD2Q12894 506 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-210ENST00000441703 BNIP3Q12983 259 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 RPS6KA1Q15418 735 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 SHBQ15464 509 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 ZRSR2Q15696 482 aaKnown RBP6.64□□□□□ -1.35
HDAC6-210ENST00000441703 FAM133BQ5BKY9 247 aaKnown RBP6.64□□□□□ -1.35
HDAC6-210ENST00000441703 SPDYAQ5MJ70 313 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 TTC38Q5R3I4 469 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 FHL5Q5TD97 284 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 TMEM154Q6P9G4 183 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 C4orf50Q6ZRC1 276 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 TPGS1Q6ZTW0 290 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 LCA5Q86VQ0 697 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 BBS7Q8IWZ6 715 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 TMEM86AQ8N2M4 240 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 RASGEF1CQ8N431 466 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 RBBP8NLQ8NC74 664 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-210ENST00000441703 SNX29Q8TEQ0 813 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 STK32AQ8WU08 396 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 UBLCP1Q8WVY7 318 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-210ENST00000441703 MAIP1Q8WWC4 291 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 AZIN2Q96A70 460 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 FAM136AQ96C01 138 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 SPATA17Q96L03 361 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 PCMTD1Q96MG8 357 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-210ENST00000441703 SLITRK1Q96PX8 696 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 SYT15Q9BQS2 421 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 FAM167BQ9BTA0 163 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 MSTO1Q9BUK6 570 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 TTLL2Q9BWV7 592 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 ROPN1BQ9BZX4 212 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-210ENST00000441703 NACA2Q9H009 215 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 BLZF1Q9H2G9 400 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 CUEDC2Q9H467 287 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 ROPN1Q9HAT0 212 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-210ENST00000441703 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.64□□□□□ -1.351e-15■■■■■ 67.3
HDAC6-210ENST00000441703 ABCF3Q9NUQ8 709 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 PCMTD2Q9NV79 361 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 EVA1BQ9NVM1 165 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 DPP3Q9NY33 737 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 AIPL1Q9NZN9 384 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 LARSQ9P2J5 1176 aaKnown RBP6.64□□□□□ -1.35
HDAC6-210ENST00000441703 PDP2Q9P2J9 529 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 CIDEBQ9UHD4 219 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 SALL4Q9UJQ4 1053 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 ANAPC2Q9UJX6 822 aa6.64□□□□□ -1.35
HDAC6-210ENST00000441703 GTF3C4Q9UKN8 822 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms