RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 ZSCAN12O43309 604 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 ACTL6BO94805 426 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 CHRNA1P02708 482 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 AHSGP02765 367 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TUBBP07437 444 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 HNRNPA1P09651 372 aaKnown RBP eCLIP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 SNRPBP14678 240 aaKnown RBP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 MCM3P25205 808 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 GABRB3P28472 473 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PRDX5P30044 214 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TTKP33981 857 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 ADRA1BP35368 520 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TRIM23P36406 574 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 NUP62P37198 522 aaPredicted RBP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 ACTR2P61160 394 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TRA2BP62995 288 aaKnown RBP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 MGAT5Q09328 741 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 ASPHQ12797 758 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 FSTL1Q12841 308 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 GIT2Q14161 759 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 NCF4Q15080 339 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 MAPRE2Q15555 327 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TRIM71Q2Q1W2 868 aaKnown RBP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 ZNF805Q5CZA5 627 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 RNASEH2BQ5TBB1 312 aaKnown RBP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 SHEQ5VZ18 495 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 OGFOD3Q6PK18 319 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 DENND5BQ6ZUT9 1274 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 BZW1Q7L1Q6 419 aaKnown RBP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TAF8Q7Z7C8 310 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PSTKQ8IV42 348 aaKnown RBP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 MCEMP1Q8IX19 187 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 CCDC105Q8IYK2 499 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 C16orf71Q8IYS4 520 aaPredicted RBP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 LSMEM2Q8N112 164 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 VGLL2Q8N8G2 317 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 DNAAF3Q8N9W5 541 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 BCL7CQ8WUZ0 217 aaPredicted RBP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 KIFAP3Q92845 792 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 SLC35B4Q969S0 331 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 RAB7BQ96AH8 199 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TMIGD2Q96BF3 282 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 SPACA9Q96E40 222 aaPredicted RBP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 FAM120BQ96EK7 910 aaKnown RBP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 CYFIP2Q96F07 1278 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 FAM46AQ96IP4 442 aaKnown RBP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 JMJD8Q96S16 334 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 DBNDD2Q9BQY9 259 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TRIM62Q9BVG3 475 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 ZNF518BQ9C0D4 1074 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 YIPF3Q9GZM5 350 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PABPC3Q9H361 631 aaKnown RBP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 VIPAS39Q9H9C1 493 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 NRIP3Q9NQ35 241 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TNFRSF10DQ9UBN6 386 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 BAIAP2L1Q9UHR4 511 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 VAV3Q9UKW4 847 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 KIAA1257Q9ULG3 409 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 NAALADL1Q9UQQ1 740 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 FAM208AQ9UK61 1670 aaKnown RBP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 RPTORQ8N122 1335 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 NFAT5O94916 1531 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 NPHP4O75161 1426 aaPredicted RBP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 A0A0A6YYJ9 748 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 hCG_1809904A0A1W2PP81 198 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 A0A1W2PPE2 198 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 A0A1W2PR64 198 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PMS2P1A4D2B8 440 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TMEM221A6NGB7 291 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 E7EVH7 732 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 E9PBE3 544 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 H0YIN7 160 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 CYP27B1O15528 508 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 CYTH3O43739 400 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TACC1O75410 805 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 RECQL4O94761 1208 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 FTCDO95954 541 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 A1BGP04217 495 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 CDK4P11802 303 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TYMPP19971 482 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PTBP1P26599 531 aaKnown RBP eCLIP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 EIF2DP41214 584 aaKnown RBP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 MAGEA4P43358 317 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 SLC6A9P48067 706 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PITPNBP48739 271 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 CAMLGP49069 296 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TAP2Q03519 686 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 EGR3Q06889 387 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 DBPQ10586 325 aaPredicted RBP6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 MAMLD1Q13495 774 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 RAB32Q13637 225 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 ITGA7Q13683 1181 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 HSP90AA4PQ58FG1 418 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 CES4AQ5XG92 561 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 ZCCHC12Q6PEW1 402 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 GLRX5Q86SX6 157 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 C12orf56Q8IXR9 622 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 BBS5Q8N3I7 341 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 SHCBP1Q8NEM2 672 aa6.01□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 GANCQ8TET4 914 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms