RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 GJB5O95377 273 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 RHOCP08134 193 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 CTSAP10619 480 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 NEFHP12036 1026 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 HLA-DPA1P20036 260 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 SLC6A4P31645 630 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 PDE1BQ01064 536 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 GNA12Q03113 381 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 CCDC15Q0P6D6 951 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 PABPC1LQ4VXU2 614 aaKnown RBP13.36□□□□□ -0.27
CPSF4-206ENST00000441580 ATG16L1Q676U5 607 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 CGB2Q6NT52 195 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 RANBP10Q6VN20 620 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 CCDC149Q6ZUS6 474 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 NLRP9Q7RTR0 991 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 TRPM8Q7Z2W7 1104 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 STRA8Q7Z7C7 330 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 LCA5Q86VQ0 697 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 CIR1Q86X95 450 aaPredicted RBP13.36□□□□□ -0.27
CPSF4-206ENST00000441580 UNC5BQ8IZJ1 945 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 TADA1Q96BN2 335 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 MFSD3Q96ES6 412 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 FEM1CQ96JP0 617 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 PRICKLE1Q96MT3 831 aaPredicted RBP13.36□□□□□ -0.27
CPSF4-206ENST00000441580 SEPT3Q9UH03 358 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 STOML2Q9UJZ1 356 aa13.36□□□□□ -0.27
CPSF4-206ENST00000441580 ANAPC1Q9H1A4 1944 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 ILVBLA1L0T0 632 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 J3KR12 359 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 SIN3BO75182 1162 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 DCTN3O75935 186 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 FSBPO95073 299 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 PAPSS2O95340 614 aaPredicted RBP13.35□□□□□ -0.27
CPSF4-206ENST00000441580 OLFM2O95897 454 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 ALDOAP04075 364 aaKnown RBP13.35□□□□□ -0.27
CPSF4-206ENST00000441580 MPOP05164 745 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 FGF1P05230 155 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 HSPA8P11142 646 aaKnown RBP13.35□□□□□ -0.27
CPSF4-206ENST00000441580 MBL2P11226 248 aaPredicted RBP13.35□□□□□ -0.27
CPSF4-206ENST00000441580 PFKLP17858 780 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 DNAJB1P25685 340 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 HOXD9P28356 352 aaPredicted RBP13.35□□□□□ -0.27
CPSF4-206ENST00000441580 ALDH3A1P30838 453 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 CD86P42081 329 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 POLD2P49005 469 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 SERPINH1P50454 418 aaKnown RBP13.35□□□□□ -0.27
CPSF4-206ENST00000441580 OXCT1P55809 520 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 HTRA4P83105 476 aaPredicted RBP13.35□□□□□ -0.27
CPSF4-206ENST00000441580 ITKQ08881 620 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 SLC10A7Q0GE19 358 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 POU6F1Q14863 301 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 ADGRF1Q5T601 910 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 TEDDM1Q5T9Z0 273 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 DENND5AQ6IQ26 1287 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 CES3Q6UWW8 571 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 KIAA0408Q6ZU52 694 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 CCDC91Q7Z6B0 441 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 DENND1CQ8IV53 801 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 FIBCD1Q8N539 461 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 HJURPQ8NCD3 748 aaPredicted RBP13.35□□□□□ -0.27
CPSF4-206ENST00000441580 CALML6Q8TD86 181 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 CCT6BQ92526 530 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 PEX13Q92968 403 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 GCNAQ96QF7 691 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 TMEM106CQ9BVX2 250 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 TSSK1BQ9BXA7 367 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 KLF16Q9BXK1 252 aaPredicted RBP13.35□□□□□ -0.27
CPSF4-206ENST00000441580 RHOJQ9H4E5 214 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 SNX15Q9NRS6 342 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 SLC17A6Q9P2U8 582 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 UBA2Q9UBT2 640 aaPredicted RBP13.35□□□□□ -0.27
CPSF4-206ENST00000441580 DCDC2Q9UHG0 476 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 LSM7Q9UK45 103 aaKnown RBP13.35□□□□□ -0.27
CPSF4-206ENST00000441580 ANKRD6Q9Y2G4 727 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 PSAT1Q9Y617 370 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 USH1CQ9Y6N9 552 aa13.35□□□□□ -0.27
CPSF4-206ENST00000441580 ZFP37Q9Y6Q3 630 aaPredicted RBP13.35□□□□□ -0.27
CPSF4-206ENST00000441580 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.34□□□□□ -0.27
CPSF4-206ENST00000441580 ZBBXA8MT70 800 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 TEX28O15482 410 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 FGF18O76093 207 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 TGDSO95455 350 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 ADH1AP07327 375 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 CES1P23141 567 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 ITGB8P26012 769 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 NMBRP28336 390 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 TYK2P29597 1187 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 DSC2Q02487 901 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 ZNF177Q13360 481 aaPredicted RBP13.34□□□□□ -0.27
CPSF4-206ENST00000441580 SEPT6Q14141 434 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 PCSK7Q16549 785 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 CCDC153Q494R4 210 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 TAF1BQ53T94 588 aaPredicted RBP13.34□□□□□ -0.27
CPSF4-206ENST00000441580 HSP90AA5PQ58FG0 334 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 PSRC1Q6PGN9 363 aaPredicted RBP13.34□□□□□ -0.27
CPSF4-206ENST00000441580 CDHR3Q6ZTQ4 885 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 OTOAQ7RTW8 1153 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 DNAJB7Q7Z6W7 309 aaPredicted RBP13.34□□□□□ -0.27
CPSF4-206ENST00000441580 GALNT7Q86SF2 657 aa13.34□□□□□ -0.27
CPSF4-206ENST00000441580 LMNTD2Q8IXW0 634 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms