RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 BNC1Q01954 994 aa18.58■□□□□ 0.56
SMPD4-210ENST00000441135 FOXC1Q12948 553 aa18.58■□□□□ 0.56
SMPD4-210ENST00000441135 CA9Q16790 459 aa18.58■□□□□ 0.56
SMPD4-210ENST00000441135 HADHQ16836 314 aaKnown RBP18.58■□□□□ 0.56
SMPD4-210ENST00000441135 HLA-BQ31612 363 aa18.58■□□□□ 0.56
SMPD4-210ENST00000441135 RFX8Q6ZV50 586 aa18.58■□□□□ 0.56
SMPD4-210ENST00000441135 Q6ZVU0 165 aa18.58■□□□□ 0.56
SMPD4-210ENST00000441135 TMTC1Q8IUR5 882 aa18.58■□□□□ 0.56
SMPD4-210ENST00000441135 FAM131CQ96AQ9 280 aa18.58■□□□□ 0.56
SMPD4-210ENST00000441135 KCTD15Q96SI1 283 aaPredicted RBP18.58■□□□□ 0.56
SMPD4-210ENST00000441135 ORAI3Q9BRQ5 295 aa18.58■□□□□ 0.56
SMPD4-210ENST00000441135 LUC7LQ9NQ29 371 aaKnown RBP18.58■□□□□ 0.56
SMPD4-210ENST00000441135 GPATCH2LQ9NWQ4 482 aa18.58■□□□□ 0.56
SMPD4-210ENST00000441135 RCOR3Q9P2K3 495 aaPredicted RBP18.58■□□□□ 0.56
SMPD4-210ENST00000441135 DNAI1Q9UI46 699 aa18.58■□□□□ 0.56
SMPD4-210ENST00000441135 FARP1Q9Y4F1 1045 aaPredicted RBP18.58■□□□□ 0.56
SMPD4-210ENST00000441135 PCDHGB2Q9Y5G2 931 aa18.58■□□□□ 0.56
SMPD4-210ENST00000441135 SLCO1B1Q9Y6L6 691 aa18.58■□□□□ 0.56
SMPD4-210ENST00000441135 NUMA1Q14980 2115 aa18.58■□□□□ 0.56
SMPD4-210ENST00000441135 ADAMTS9Q9P2N4 1935 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 SPAARA0A1B0GVQ0 90 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 C10orf142B7Z368 130 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 EEF2KO00418 725 aaKnown RBP18.57■□□□□ 0.56
SMPD4-210ENST00000441135 SH3BP5O60239 455 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 ARHGAP25P42331 645 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 SERPINH1P50454 418 aaKnown RBP18.57■□□□□ 0.56
SMPD4-210ENST00000441135 NDST2P52849 883 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 RACK1P63244 317 aaKnown RBP18.57■□□□□ 0.56
SMPD4-210ENST00000441135 ARF5P84085 180 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 POLD3Q15054 466 aaPredicted RBP18.57■□□□□ 0.56
SMPD4-210ENST00000441135 KIF19Q2TAC6 998 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 ADAT2Q7Z6V5 191 aaKnown RBP18.57■□□□□ 0.56
SMPD4-210ENST00000441135 PLPP6Q8IY26 295 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 ATP11CQ8NB49 1132 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 OR14C36Q8NHC7 312 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 FAM71BQ8TC56 605 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 CASKIN2Q8WXE0 1202 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 ISG20Q96AZ6 181 aaKnown RBP18.57■□□□□ 0.56
SMPD4-210ENST00000441135 BTBD6Q96KE9 485 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 SPON2Q9BUD6 331 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 KDM4CQ9H3R0 1056 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 NOL6Q9H6R4 1146 aaKnown RBP18.57■□□□□ 0.56
SMPD4-210ENST00000441135 ZWILCHQ9H900 591 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 TM7SF3Q9NS93 570 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 PPM1HQ9ULR3 514 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 HPCAL4Q9UM19 191 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 ANKRD6Q9Y2G4 727 aa18.57■□□□□ 0.56
SMPD4-210ENST00000441135 FNDC3AQ9Y2H6 1198 aaKnown RBP18.57■□□□□ 0.56
SMPD4-210ENST00000441135 H3BRJ5 948 aa18.56■□□□□ 0.56
SMPD4-210ENST00000441135 CBX4O00257 560 aa18.56■□□□□ 0.56
SMPD4-210ENST00000441135 TRIM16O95361 564 aa18.56■□□□□ 0.56
SMPD4-210ENST00000441135 RARAP10276 462 aa18.56■□□□□ 0.56
SMPD4-210ENST00000441135 DRD3P35462 400 aa18.56■□□□□ 0.56
SMPD4-210ENST00000441135 HADHBP55084 474 aaKnown RBP18.56■□□□□ 0.56
SMPD4-210ENST00000441135 DPYSQ14117 519 aa18.56■□□□□ 0.56
SMPD4-210ENST00000441135 ZNF423Q2M1K9 1284 aa18.56■□□□□ 0.56
SMPD4-210ENST00000441135 C22orf39Q6P5X5 142 aa18.56■□□□□ 0.56
SMPD4-210ENST00000441135 LZTR1Q8N653 840 aa18.56■□□□□ 0.56
SMPD4-210ENST00000441135 PCDH20Q8N6Y1 951 aaKnown RBP18.56■□□□□ 0.56
SMPD4-210ENST00000441135 SLC35G2Q8TBE7 412 aa18.56■□□□□ 0.56
SMPD4-210ENST00000441135 SKA1Q96BD8 255 aa18.56■□□□□ 0.56
SMPD4-210ENST00000441135 IL21RQ9HBE5 538 aa18.56■□□□□ 0.56
SMPD4-210ENST00000441135 WASF3Q9UPY6 502 aa18.56■□□□□ 0.56
SMPD4-210ENST00000441135 PCDHB9Q9Y5E1 797 aa18.56■□□□□ 0.56
SMPD4-210ENST00000441135 VILLO15195 856 aa18.55■□□□□ 0.56
SMPD4-210ENST00000441135 FLRT2O43155 660 aa18.55■□□□□ 0.56
SMPD4-210ENST00000441135 KDELR3O43731 214 aa18.55■□□□□ 0.56
SMPD4-210ENST00000441135 MT-CO1P00395 513 aa18.55■□□□□ 0.56
SMPD4-210ENST00000441135 TCF4P15884 667 aa18.55■□□□□ 0.56
SMPD4-210ENST00000441135 GLDCP23378 1020 aa18.55■□□□□ 0.56
SMPD4-210ENST00000441135 NUDT1P36639 197 aa18.55■□□□□ 0.56
SMPD4-210ENST00000441135 ACVRL1P37023 503 aa18.55■□□□□ 0.56
SMPD4-210ENST00000441135 ARL4AP40617 200 aa18.55■□□□□ 0.56
SMPD4-210ENST00000441135 C21orf59P57076 290 aa18.55■□□□□ 0.56
SMPD4-210ENST00000441135 TRIP6Q15654 476 aaKnown RBP18.55■□□□□ 0.56
SMPD4-210ENST00000441135 AFMIDQ63HM1 303 aa18.55■□□□□ 0.56
SMPD4-210ENST00000441135 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.55■□□□□ 0.56
SMPD4-210ENST00000441135 POLNQ7Z5Q5 900 aa18.55■□□□□ 0.56
SMPD4-210ENST00000441135 PIP4K2CQ8TBX8 421 aa18.55■□□□□ 0.56
SMPD4-210ENST00000441135 SLC6A18Q96N87 628 aa18.55■□□□□ 0.56
SMPD4-210ENST00000441135 LRRC19Q9H756 370 aa18.55■□□□□ 0.56
SMPD4-210ENST00000441135 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.55■□□□□ 0.56
SMPD4-210ENST00000441135 CWC15Q9P013 229 aaKnown RBP18.55■□□□□ 0.56
SMPD4-210ENST00000441135 SNX11Q9Y5W9 270 aa18.55■□□□□ 0.56
SMPD4-210ENST00000441135 A0A0A6YYK5 440 aaPredicted RBP18.54■□□□□ 0.56
SMPD4-210ENST00000441135 GOLGA6L6A8MZA4 724 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 RASA4BC9J798 803 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 DAPK3O43293 454 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 RASA4O43374 803 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 LATO43561 262 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 PLRG1O43660 514 aaKnown RBP18.54■□□□□ 0.56
SMPD4-210ENST00000441135 BNIP3LO60238 219 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 DFNA5O60443 496 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 CD160O95971 181 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 KRT7P08729 469 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 ERCC2P18074 760 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 CTSKP43235 329 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 MAGEA1P43355 309 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 CCT8P50990 548 aa18.54■□□□□ 0.56
SMPD4-210ENST00000441135 CCDC15Q0P6D6 951 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms