RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 HSPA1BP0DMV9 641 aaKnown RBP12.07□□□□□ -0.48
LTBR-203ENST00000441074 MLNP12872 115 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 GPD1P21695 349 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 TTKP33981 857 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 GARSP41250 739 aaKnown RBP12.07□□□□□ -0.48
LTBR-203ENST00000441074 PSMD8P48556 350 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 RHDQ02161 417 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 PTPN11Q06124 597 aaPredicted RBP12.07□□□□□ -0.48
LTBR-203ENST00000441074 MAP2K5Q13163 448 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 SEMA5AQ13591 1074 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 TRIM25Q14258 630 aaKnown RBP12.07□□□□□ -0.48
LTBR-203ENST00000441074 NHSL2Q5HYW2 709 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 NANOGP8Q6NSW7 305 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 MPZL3Q6UWV2 235 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 TERB1Q8NA31 727 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 ZSCAN18Q8TBC5 510 aaPredicted RBP12.07□□□□□ -0.48
LTBR-203ENST00000441074 ZNF296Q8WUU4 475 aaPredicted RBP12.07□□□□□ -0.48
LTBR-203ENST00000441074 PGBD4Q96DM1 585 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 DUS3LQ96G46 650 aaKnown RBP12.07□□□□□ -0.48
LTBR-203ENST00000441074 UHRF1Q96T88 793 aaPredicted RBP12.07□□□□□ -0.48
LTBR-203ENST00000441074 TRPV6Q9H1D0 765 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 RPF2Q9H7B2 306 aaKnown RBP12.07□□□□□ -0.48
LTBR-203ENST00000441074 ANLNQ9NQW6 1124 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 SPATA7Q9P0W8 599 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 SUCOQ9UBS9 1254 aaKnown RBP12.07□□□□□ -0.48
LTBR-203ENST00000441074 GNPTGQ9UJJ9 305 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 CDC14AQ9UNH5 594 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 PSAT1Q9Y617 370 aa12.07□□□□□ -0.48
LTBR-203ENST00000441074 C9IYK1 514 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 K7EPI3 171 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 PRPSAP2O60256 369 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 FOXD2O60548 495 aaPredicted RBP12.06□□□□□ -0.48
LTBR-203ENST00000441074 AMHP03971 560 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 CDH3P22223 829 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 GABRB3P28472 473 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 MAGEA12P43365 314 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 RXRGP48443 463 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 PTK2BQ14289 1009 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 BCL2A1Q16548 175 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 MOGQ16653 247 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 KIZQ2M2Z5 673 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 SH3PXD2AQ5TCZ1 1133 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 SEL1L3Q68CR1 1132 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 PPP4R4Q6NUP7 873 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 TNS4Q8IZW8 715 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 FAM47BQ8NA70 645 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 TFAP2CQ92754 450 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 ISL2Q96A47 359 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 CCDC68Q9H2F9 335 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 CXorf21Q9HAI6 301 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 CDHR5Q9HBB8 845 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 ZBTB26Q9HCK0 441 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 DUS2Q9NX74 493 aaKnown RBP12.06□□□□□ -0.48
LTBR-203ENST00000441074 UTP6Q9NYH9 597 aaKnown RBP12.06□□□□□ -0.48
LTBR-203ENST00000441074 KIAA1522Q9P206 1035 aaPredicted RBP12.06□□□□□ -0.48
LTBR-203ENST00000441074 NXF1Q9UBU9 619 aaKnown RBP12.06□□□□□ -0.48
LTBR-203ENST00000441074 RAP2CQ9Y3L5 183 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 FAM32AQ9Y421 112 aaKnown RBP12.06□□□□□ -0.48
LTBR-203ENST00000441074 DOCK3Q8IZD9 2030 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 TRIM64A6NGJ6 449 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 TRIM64BA6NI03 449 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 NEMP1O14524 444 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 TNPO2O14787 897 aaKnown RBP12.06□□□□□ -0.48
LTBR-203ENST00000441074 GIPC1O14908 333 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 XPOTO43592 962 aaKnown RBP12.06□□□□□ -0.48
LTBR-203ENST00000441074 MICAL2O94851 1124 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 CSPG5O95196 566 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 UGT1A6P19224 532 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 TCN1P20061 433 aaPredicted RBP12.06□□□□□ -0.48
LTBR-203ENST00000441074 UGT1A1P22309 533 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 UGT1A4P22310 534 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 DCKP27707 260 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 SLC7A1P30825 629 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 UGT1A3P35503 534 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 UGT1A5P35504 534 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 TMED10P49755 219 aaKnown RBP12.06□□□□□ -0.48
LTBR-203ENST00000441074 RPL14P50914 215 aaKnown RBP12.06□□□□□ -0.48
LTBR-203ENST00000441074 TRIM32Q13049 653 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 BOLA3Q53S33 107 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 FAM102AQ5T9C2 384 aaPredicted RBP12.06□□□□□ -0.48
LTBR-203ENST00000441074 CASC4Q6P4E1 433 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 C16orf87Q6PH81 154 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 TMEM110Q86TL2 294 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 TNIP2Q8NFZ5 429 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 PCDH19Q8TAB3 1148 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 GATA5Q9BWX5 397 aaPredicted RBP12.06□□□□□ -0.48
LTBR-203ENST00000441074 FAM124BQ9H5Z6 455 aaPredicted RBP12.06□□□□□ -0.48
LTBR-203ENST00000441074 CYP3A43Q9HB55 503 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 SNX15Q9NRS6 342 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 GJD2Q9UKL4 321 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 ADAM28Q9UKQ2 775 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 TRIM17Q9Y577 477 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 LAMA3Q16787 3333 aa12.06□□□□□ -0.48
LTBR-203ENST00000441074 CCDC162PA2VCL2 907 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 TCAF2A6NFQ2 919 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 ZNF487B1APH4 448 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 H3BMQ9 156 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 M0QYV0 167 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 FKTNO75072 461 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 SULT1C4O75897 302 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms