RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PNPLA1Q8N8W4 532 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 MAGEB5Q9BZ81 275 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 HECAQ9UBI9 543 aaPredicted RBP20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 FTSJ1Q9UET6 329 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 KLK13Q9UKR3 277 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 USP24Q9UPU5 2620 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 BTBD3Q9Y2F9 522 aa20.23■□□□□ 0.83
SHROOM1-204ENST00000440118 A0A1B0GTQ1 180 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 TCRBV5S1A1TA0A578 114 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 ZSCAN5CA6NGD5 496 aaPredicted RBP20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 C1QTNF9BB2RNN3 333 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 WNT9AO14904 365 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 SLC31A1O15431 190 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 BUB1O43683 1085 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 CBFA2T3O75081 653 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 ITGAVP06756 1048 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 C1QTNF9P0C862 333 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 PRLRP16471 622 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 ITGB7P26010 798 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 TPI1P60174 286 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 SNRPD1P62314 119 aaKnown RBP20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 IQCB1Q15051 598 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 PRAMEF14Q5SWL7 426 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 ARTNQ5T4W7 220 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 LUZP1Q86V48 1076 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 OXR1Q8N573 874 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 MFSD2AQ8NA29 543 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 OR6K2Q8NGY2 324 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 KLK6Q92876 244 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 ZNF653Q96CK0 615 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 NAP1L5Q96NT1 182 aaPredicted RBP20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 FUCA2Q9BTY2 467 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 HDAC8Q9BY41 377 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 CBX8Q9HC52 389 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 FZD10Q9ULW2 581 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 NEU3Q9UQ49 428 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 ACTL7AQ9Y615 435 aa20.22■□□□□ 0.83
SHROOM1-204ENST00000440118 A0A1W2PR77 199 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 KRIT1O00522 736 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 FGF10O15520 208 aaPredicted RBP20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 RNF8O76064 485 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 AKT2P31751 481 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 NXPH1P58417 271 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 TAS2R38P59533 333 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 MAMLD1Q13495 774 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 PPP1R15BQ5SWA1 713 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 NEK5Q6P3R8 708 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 ZNF571Q7Z3V5 609 aaPredicted RBP20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 GLRX5Q86SX6 157 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 VPS36Q86VN1 386 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 HORMAD1Q86X24 394 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 GATAD2AQ86YP4 633 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 TRIM11Q96F44 468 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 DONSONQ9NYP3 566 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 AIPL1Q9NZN9 384 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 CNOT8Q9UFF9 292 aaKnown RBP20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 WASF3Q9UPY6 502 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 SCINQ9Y6U3 715 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 WASF2Q9Y6W5 498 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 FRYQ5TBA9 3013 aa20.21■□□□□ 0.83
SHROOM1-204ENST00000440118 CXorf51AA0A1B0GTR3 108 aa20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 NEMP1O14524 444 aa20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 FTLP02792 175 aaPredicted RBP20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 PROS1P07225 676 aa20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 ADRB3P13945 408 aa20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 FANCCQ00597 558 aa20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 OVGP1Q12889 678 aa20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 MAPK8IP2Q13387 824 aaPredicted RBP20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 RAB44Q7Z6P3 723 aaPredicted RBP20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 IQCHQ86VS3 1027 aa20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 OR2AP1Q8NGE2 309 aa20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 ADAMTS14Q8WXS8 1223 aa20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 ISG20Q96AZ6 181 aaKnown RBP20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 KLHDC7BQ96G42 594 aa20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 GDAP1L1Q96MZ0 367 aa20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 SYT11Q9BT88 431 aa20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 EDEM3Q9BZQ6 932 aa20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 DHX35Q9H5Z1 703 aaKnown RBP20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 ARHGAP20Q9P2F6 1191 aa20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 MYO1AQ9UBC5 1043 aa20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 AP4E1Q9UPM8 1137 aa20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 CA5BQ9Y2D0 317 aa20.2■□□□□ 0.82
SHROOM1-204ENST00000440118 AKAP13Q12802 2813 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 TDRD6O60522 2096 aaKnown RBP20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 DAPK3O43293 454 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 TNFSF14O43557 240 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 KDELR3O43731 214 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 PRPSAP2O60256 369 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 ZNF821O75541 412 aaPredicted RBP20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 TMCC1O94876 653 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 IGSF6O95976 241 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 GSRP00390 522 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 GZMAP12544 262 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 SKILP12757 684 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 PRKCIP41743 596 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 UBASH3AP57075 661 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 RHOAP61586 193 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 OGDHQ02218 1023 aa20.19■□□□□ 0.82
SHROOM1-204ENST00000440118 RAD51Q06609 339 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms