RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 NAT9Q9BTE0 207 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 PITPNM3Q9BZ71 974 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 LRMDAQ9H2I8 198 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ECT2Q9H8V3 914 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 HPS4Q9NQG7 708 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 MARCH2Q9P0N8 246 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 USP18Q9UMW8 372 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 ASB3Q9Y575 518 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 SNX10Q9Y5X0 201 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 SMG1Q96Q15 3661 aaKnown RBP4.86□□□□□ -1.63
EDEM3-203ENST00000439962 EPG5Q9HCE0 2579 aa4.86□□□□□ -1.63
EDEM3-203ENST00000439962 MAP1BP46821 2468 aaKnown RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 TSC2P49815 1807 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 PRR23AA6NEV1 266 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 GOLGA8CPA6NN73 597 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 ANHXE9PGG2 379 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 AP3B1O00203 1094 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 TNFRSF10BO14763 440 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 LAMTOR5O43504 91 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 CST8O60676 142 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 GCATO75600 419 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 TROVE2P10155 538 aaKnown RBP eCLIP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 TFE3P19532 575 aaPredicted RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 PRKCHP24723 683 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 CORO1AP31146 461 aaKnown RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 GJA4P35212 333 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 RFC1P35251 1148 aaPredicted RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 CCNFP41002 786 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 GTF2A1P52655 376 aaPredicted RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 EIF3EP60228 445 aaKnown RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 NCALDP61601 193 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 YWHAGP61981 247 aaKnown RBP eCLIP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 SARNPP82979 210 aaKnown RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 PDIA2Q13087 525 aaKnown RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 DPYSL3Q14195 570 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 GAS6Q14393 721 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 ITPRIPL2Q3MIP1 535 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 RAB6CQ53S08 254 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 TIFABQ6ZNK6 161 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 STRADAQ7RTN6 431 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 SCD5Q86SK9 330 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 CRYBG2Q8N1P7 616 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 ANKRD52Q8NB46 1076 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 KCTD6Q8NC69 237 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 PRSS33Q8NF86 280 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 PJA1Q8NG27 643 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 SLC44A1Q8WWI5 657 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 ELSPBP1Q96BH3 223 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 HSFY1Q96LI6 401 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 RNF157Q96PX1 679 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 CPXM1Q96SM3 734 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 ACOX2Q99424 681 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 HNRNPABQ99729 332 aaKnown RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 FERMT1Q9BQL6 677 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 HEMGNQ9BXL5 484 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 MAK16Q9BXY0 300 aaKnown RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 KLC2Q9H0B6 622 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 BRD8Q9H0E9 1235 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 RAB6CQ9H0N0 254 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 MTG2Q9H4K7 406 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 EBF2Q9HAK2 575 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 XAB2Q9HCS7 855 aaKnown RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 LTB4R2Q9NPC1 389 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 KCNK9Q9NPC2 374 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 BATF3Q9NR55 127 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 DNAJC17Q9NVM6 304 aaKnown RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 CLEC4EQ9ULY5 219 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 ACACBO00763 2458 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 KIF26AQ9ULI4 1882 aaPredicted RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 LIN7AO14910 233 aaPredicted RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 BIRC5O15392 142 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 PRPSAP2O60256 369 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 GABBR2O75899 941 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 ATP6V1G2O95670 118 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 KLKB1P03952 638 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 MIPP30301 263 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 RPL22P35268 128 aaKnown RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 FDFT1P37268 417 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 MSH2P43246 934 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 SSR1P43307 286 aaKnown RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 MAGEA3P43357 314 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 MNAT1P51948 309 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 BCAT1P54687 386 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 SATB1Q01826 763 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 SLC6A3Q01959 620 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 BST2Q10589 180 aaKnown RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 KRT72Q14CN4 511 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 LLGL1Q15334 1064 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 TMED2Q15363 201 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 DPYSL2Q16555 572 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 WASHC2DQ5SRD0 308 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 TTC39BQ5VTQ0 682 aaPredicted RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 HHATQ5VTY9 493 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 C1orf228Q6PIY5 440 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 SLC26A9Q7LBE3 791 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 SRRM1Q8IYB3 904 aaKnown RBP4.85□□□□□ -1.63
EDEM3-203ENST00000439962 CHPFQ8IZ52 775 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 BANPQ8N9N5 519 aa4.85□□□□□ -1.63
EDEM3-203ENST00000439962 C2orf15Q8WU43 125 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms