RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 RAMP2O60895 175 aa16.59■□□□□ 0.25
SNRPD3-204ENST00000439775 CD160O95971 181 aa16.59■□□□□ 0.25
SNRPD3-204ENST00000439775 PLEKP08567 350 aaPredicted RBP16.59■□□□□ 0.25
SNRPD3-204ENST00000439775 FERP16591 822 aa16.59■□□□□ 0.25
SNRPD3-204ENST00000439775 CCNHP51946 323 aaPredicted RBP16.59■□□□□ 0.25
SNRPD3-204ENST00000439775 NEK3P51956 506 aa16.59■□□□□ 0.25
SNRPD3-204ENST00000439775 ZNF143P52747 638 aaPredicted RBP16.59■□□□□ 0.25
SNRPD3-204ENST00000439775 AIF1P55008 147 aa16.59■□□□□ 0.25
SNRPD3-204ENST00000439775 CARD16Q5EG05 197 aa16.59■□□□□ 0.25
SNRPD3-204ENST00000439775 DNAJC24Q6P3W2 148 aa16.59■□□□□ 0.25
SNRPD3-204ENST00000439775 GALNT15Q8N3T1 639 aa16.59■□□□□ 0.25
SNRPD3-204ENST00000439775 ARHGEF2Q92974 986 aaKnown RBP16.59■□□□□ 0.25
SNRPD3-204ENST00000439775 HEPHQ9BQS7 1158 aa16.59■□□□□ 0.25
SNRPD3-204ENST00000439775 TMEM63CQ9P1W3 806 aa16.59■□□□□ 0.25
SNRPD3-204ENST00000439775 FCF1Q9Y324 198 aaKnown RBP16.59■□□□□ 0.25
SNRPD3-204ENST00000439775 PCDHGA1Q9Y5H4 931 aa16.59■□□□□ 0.25
SNRPD3-204ENST00000439775 ANKRD62A6NC57 917 aa16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 GOLGA8CPA6NN73 597 aa16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 CCP110O43303 1012 aa16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 HNRNPA2B1P22626 353 aaKnown RBP16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 AKT2P31751 481 aa16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 L1CAMP32004 1257 aa16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 TMEM259Q4ZIN3 620 aa16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 EFHC2Q5JST6 749 aa16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 PPP1R15BQ5SWA1 713 aa16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 PPP1R2P3Q6NXS1 205 aa16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 KANSL1Q7Z3B3 1105 aa16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 SLFN11Q7Z7L1 901 aa16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 ZSCAN30Q86W11 494 aa16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 PROSER1Q86XN7 944 aa16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 MCEEQ96PE7 176 aa16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 SYT11Q9BT88 431 aa16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 DNAI1Q9UI46 699 aa16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 HPCAL4Q9UM19 191 aa16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 ZFR2Q9UPR6 939 aaKnown RBP16.58■□□□□ 0.24
SNRPD3-204ENST00000439775 CHD5Q8TDI0 1954 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 ZSCAN5CA6NGD5 496 aaPredicted RBP16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 ENC1O14682 589 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 AP1G1O43747 822 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 LDOC1O95751 146 aaPredicted RBP16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 CDK4P11802 303 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 ADRB3P13945 408 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 PRLRP16471 622 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 DNA2P51530 1060 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 SMAD1Q15797 465 aaKnown RBP16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 ANO6Q4KMQ2 910 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 KIAA1161Q6NSJ0 714 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 IRF2BP2Q7Z5L9 587 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 MCOLN2Q8IZK6 566 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 RTL3Q8N8U3 475 aaKnown RBP16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 FAM174AQ8TBP5 190 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 BAP1Q92560 729 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 KLHDC7BQ96G42 594 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 LRIG1Q96JA1 1093 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 CNDP2Q96KP4 475 aaKnown RBP16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 CNPY3Q9BT09 278 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 MAGEB5Q9BZ81 275 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 TM6SF2Q9BZW4 377 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 RTN4Q9NQC3 1192 aaKnown RBP16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 HECAQ9UBI9 543 aaPredicted RBP16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 CA5BQ9Y2D0 317 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 ACTL7AQ9Y615 435 aa16.57■□□□□ 0.24
SNRPD3-204ENST00000439775 SLC31A1O15431 190 aa16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 TEX33O43247 280 aa16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 PCDH8O95206 1070 aa16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 GSRP00390 522 aa16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 C1SP09871 688 aa16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 DESP17661 470 aa16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 EPHB2P29323 1055 aa16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 RPL7AP62424 266 aaKnown RBP16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 POLD3Q15054 466 aaPredicted RBP16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 ACAD10Q6JQN1 1059 aa16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 FBXL19Q6PCT2 694 aa16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 PARS2Q7L3T8 475 aaKnown RBP16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 ABI3BPQ7Z7G0 1075 aa16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 OR2AP1Q8NGE2 309 aa16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 VCPIP1Q96JH7 1222 aa16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 ZDHHC6Q9H6R6 413 aa16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 FZD10Q9ULW2 581 aa16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 FADS3Q9Y5Q0 445 aa16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 PTPRBP23467 1997 aa16.56■□□□□ 0.24
SNRPD3-204ENST00000439775 PKD1L2Q7Z442 2459 aa16.55■□□□□ 0.24
SNRPD3-204ENST00000439775 SMTNL1A8MU46 457 aa16.55■□□□□ 0.24
SNRPD3-204ENST00000439775 WASH4PA8MWX3 477 aa16.55■□□□□ 0.24
SNRPD3-204ENST00000439775 KDELR3O43731 214 aa16.55■□□□□ 0.24
SNRPD3-204ENST00000439775 THEGLP0DJG4 465 aa16.55■□□□□ 0.24
SNRPD3-204ENST00000439775 HTR7P34969 479 aa16.55■□□□□ 0.24
SNRPD3-204ENST00000439775 ACADVLP49748 655 aa16.55■□□□□ 0.24
SNRPD3-204ENST00000439775 YBEYP58557 167 aaPredicted RBP16.55■□□□□ 0.24
SNRPD3-204ENST00000439775 SNRPD1P62314 119 aaKnown RBP16.55■□□□□ 0.24
SNRPD3-204ENST00000439775 RPS21P63220 83 aaKnown RBP16.55■□□□□ 0.24
SNRPD3-204ENST00000439775 BNIP3Q12983 259 aa16.55■□□□□ 0.24
SNRPD3-204ENST00000439775 SEL1L3Q68CR1 1132 aa16.55■□□□□ 0.24
SNRPD3-204ENST00000439775 DCUN1D2Q6PH85 259 aa16.55■□□□□ 0.24
SNRPD3-204ENST00000439775 DHRS13Q6UX07 377 aa16.55■□□□□ 0.24
SNRPD3-204ENST00000439775 GCNT7Q6ZNI0 430 aa16.55■□□□□ 0.24
SNRPD3-204ENST00000439775 PYROXD2Q8N2H3 581 aa16.55■□□□□ 0.24
SNRPD3-204ENST00000439775 EID2Q8N6I1 236 aa16.55■□□□□ 0.24
SNRPD3-204ENST00000439775 CASKIN2Q8WXE0 1202 aa16.55■□□□□ 0.24
SNRPD3-204ENST00000439775 TSC1Q92574 1164 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms