RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 NCKAP1Q9Y2A7 1128 aa19.81■□□□□ 0.76
SEMA3B-206ENST00000439487 C1QTNF3-AMACRE9PGA6 284 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 PLK4O00444 970 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 NRDCO43847 1150 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 GFRA3O60609 400 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 PALMO75781 387 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 MAP3K6O95382 1288 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 GSRP00390 522 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 C5AR1P21730 350 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 DHPSP49366 369 aaPredicted RBP19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 CCNHP51946 323 aaPredicted RBP19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 RHOAP61586 193 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 SNRPD1P62314 119 aaKnown RBP19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 GSE1Q14687 1217 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 IFI16Q16666 785 aaKnown RBP19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 ARSIQ5FYB1 569 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 ATXN7L2Q5T6C5 722 aaPredicted RBP19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 FAM46CQ5VWP2 391 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 ARMCX6Q7L4S7 300 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 LPCAT2Q7L5N7 544 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 VSIG1Q86XK7 387 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 RFX6Q8HWS3 928 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 HDDC3Q8N4P3 179 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 OR2AP1Q8NGE2 309 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 OR6K2Q8NGY2 324 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 GRIN3AQ8TCU5 1115 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 OMDQ99983 421 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 HEPHQ9BQS7 1158 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 GPR174Q9BXC1 333 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 MAK16Q9BXY0 300 aaKnown RBP19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 NEUROG2Q9H2A3 272 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 NCDNQ9UBB6 729 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 LHX3Q9UBR4 397 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 WASF2Q9Y6W5 498 aa19.8■□□□□ 0.76
SEMA3B-206ENST00000439487 GVINP1Q7Z2Y8 2422 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 ZNF487B1APH4 448 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 RNASEH2AO75792 299 aaKnown RBP19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 GKP32189 559 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 ACSL1P33121 698 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 DRD3P35462 400 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 GBE1Q04446 702 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 SFSWAPQ12872 951 aaKnown RBP19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 LLGL1Q15334 1064 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 SPOCD1Q6ZMY3 1216 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 USP30Q70CQ3 517 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 PLPP6Q8IY26 295 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 KATNAL2Q8IYT4 538 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 DCLK2Q8N568 766 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 ATPAF2Q8N5M1 289 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 TMIEQ8NEW7 156 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 BTBD1Q9H0C5 482 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 ZDHHC6Q9H6R6 413 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 GMEB2Q9UKD1 530 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 GUCA1BQ9UMX6 200 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 TRPM6Q9BX84 2022 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 ZNF292O60281 2723 aa19.79■□□□□ 0.76
SEMA3B-206ENST00000439487 KNL1Q8NG31 2342 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 KPNA3O00505 521 aaPredicted RBP19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 MAFKO60675 156 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 LEFTY1O75610 366 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 EPN2O95208 641 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 PRNPP04156 253 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 RETP07949 1114 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 CCDC175P0C221 793 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 CTNNA1P35221 906 aaKnown RBP19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 CDKN2BP42772 138 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 PTGER3P43115 390 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 SLC10A2Q12908 348 aaPredicted RBP19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 MYLK3Q32MK0 819 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 SLC9A4Q6AI14 798 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 NT5DC3Q86UY8 548 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 SLC41A1Q8IVJ1 513 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 RCOR2Q8IZ40 523 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 PLD5Q8N7P1 536 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 ARRDC3Q96B67 414 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 LOXL4Q96JB6 756 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 EXOC2Q96KP1 924 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 HINFPQ9BQA5 517 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 TSGA10Q9BZW7 698 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 EVLQ9UI08 416 aaPredicted RBP19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 AMFRQ9UKV5 643 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 PCDHA3Q9Y5H8 950 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 CAPN6Q9Y6Q1 641 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 ADAMTS9Q9P2N4 1935 aa19.78■□□□□ 0.76
SEMA3B-206ENST00000439487 KRIT1O00522 736 aa19.77■□□□□ 0.76
SEMA3B-206ENST00000439487 APOL1O14791 398 aa19.77■□□□□ 0.76
SEMA3B-206ENST00000439487 INSIG1O15503 277 aa19.77■□□□□ 0.76
SEMA3B-206ENST00000439487 KRT86O43790 486 aa19.77■□□□□ 0.76
SEMA3B-206ENST00000439487 ZRANB2O95218 330 aaKnown RBP eCLIP19.77■□□□□ 0.76
SEMA3B-206ENST00000439487 POP4O95707 220 aaKnown RBP19.77■□□□□ 0.76
SEMA3B-206ENST00000439487 IGSF6O95976 241 aa19.77■□□□□ 0.76
SEMA3B-206ENST00000439487 PEX11BO96011 259 aa19.77■□□□□ 0.76
SEMA3B-206ENST00000439487 PTMAP06454 111 aaKnown RBP19.77■□□□□ 0.76
SEMA3B-206ENST00000439487 KRT10P13645 584 aa19.77■□□□□ 0.76
SEMA3B-206ENST00000439487 CTNNA2P26232 953 aa19.77■□□□□ 0.76
SEMA3B-206ENST00000439487 DYNLT1P63172 113 aa19.77■□□□□ 0.76
SEMA3B-206ENST00000439487 CREB5Q02930 508 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms