RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 PREBQ9HCU5 417 aa10.66□□□□□ -0.7
MCF2L-216ENST00000439475 UBA2Q9UBT2 640 aaPredicted RBP10.66□□□□□ -0.7
MCF2L-216ENST00000439475 SERGEFQ9UGK8 458 aa10.66□□□□□ -0.7
MCF2L-216ENST00000439475 SARDHQ9UL12 918 aa10.66□□□□□ -0.7
MCF2L-216ENST00000439475 DMTF1Q9Y222 760 aa10.66□□□□□ -0.7
MCF2L-216ENST00000439475 CHD5Q8TDI0 1954 aa10.66□□□□□ -0.7
MCF2L-216ENST00000439475 ADAMTS9Q9P2N4 1935 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 TM4SF5O14894 197 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 PLRG1O43660 514 aaKnown RBP10.65□□□□□ -0.7
MCF2L-216ENST00000439475 DFNA5O60443 496 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 LEFTY1O75610 366 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 IGSF6O95976 241 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 TMEM253P0C7T8 217 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 RARAP10276 462 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 CSRP1P21291 193 aaKnown RBP10.65□□□□□ -0.7
MCF2L-216ENST00000439475 SERPINB6P35237 376 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 NEK3P51956 506 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 C21orf59P57076 290 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 RHOAP61586 193 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 GRIK2Q13002 908 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 SLC14A1Q13336 389 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 SERINC3Q13530 473 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 HNRNPDQ14103 355 aaKnown RBP10.65□□□□□ -0.7
MCF2L-216ENST00000439475 STAT4Q14765 748 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 GRM3Q14832 879 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 DPYSL2Q16555 572 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 CA9Q16790 459 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 MYLK3Q32MK0 819 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 POM121L1PQ3SYA9 428 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 SETMARQ53H47 684 aaPredicted RBP10.65□□□□□ -0.7
MCF2L-216ENST00000439475 PPM1JQ5JR12 505 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 KCNT1Q5JUK3 1230 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 ZFYVE27Q5T4F4 411 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 ZSCAN30Q86W11 494 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 MAP7D3Q8IWC1 876 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 RHOT2Q8IXI1 618 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 CHST14Q8NCH0 376 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 GRIN3AQ8TCU5 1115 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 NSMCE1Q8WV22 266 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 HSPH1Q92598 858 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 FAM131CQ96AQ9 280 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 ARHGEF26Q96DR7 871 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 HMCESQ96FZ2 354 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 FEM1CQ96JP0 617 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 GDAP1L1Q96MZ0 367 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 PEBP4Q96S96 227 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 KCTD15Q96SI1 283 aaPredicted RBP10.65□□□□□ -0.7
MCF2L-216ENST00000439475 CHP1Q99653 195 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 HDAC8Q9BY41 377 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 SLC39A8Q9C0K1 460 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 SP110Q9HB58 689 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 TM9SF3Q9HD45 589 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 LUC7LQ9NQ29 371 aaKnown RBP10.65□□□□□ -0.7
MCF2L-216ENST00000439475 AASDHPPTQ9NRN7 309 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 NEU3Q9UQ49 428 aa10.65□□□□□ -0.7
MCF2L-216ENST00000439475 NYNRINQ9P2P1 1898 aaKnown RBP10.64□□□□□ -0.71
MCF2L-216ENST00000439475 GVINP1Q7Z2Y8 2422 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 A0A1B0GVT2 93 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 KRIT1O00522 736 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 RNGTTO60942 597 aaKnown RBP10.64□□□□□ -0.71
MCF2L-216ENST00000439475 ZNF821O75541 412 aaPredicted RBP10.64□□□□□ -0.71
MCF2L-216ENST00000439475 TMCC1O94876 653 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 PCDH8O95206 1070 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 CD160O95971 181 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 IGHV4-34P06331 123 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 CTSLP07711 333 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 KRT7P08729 469 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 CEACAM1P13688 526 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 ITGB7P26010 798 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 CD38P28907 300 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 CSNK1EP49674 416 aaKnown RBP10.64□□□□□ -0.71
MCF2L-216ENST00000439475 PAPOLAP51003 745 aaKnown RBP10.64□□□□□ -0.71
MCF2L-216ENST00000439475 RFTN1Q14699 578 aaPredicted RBP10.64□□□□□ -0.71
MCF2L-216ENST00000439475 SMTNL2Q2TAL5 461 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 ASTE1Q2TB18 679 aaPredicted RBP10.64□□□□□ -0.71
MCF2L-216ENST00000439475 TMCO4Q5TGY1 634 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 AGBL4Q5VU57 503 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 TMCO3Q6UWJ1 677 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 TRIM69Q86WT6 500 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 BBS5Q8N3I7 341 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 C1orf216Q8TAB5 229 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 RAB7BQ96AH8 199 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 ARRDC3Q96B67 414 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 CELF6Q96J87 481 aaKnown RBP10.64□□□□□ -0.71
MCF2L-216ENST00000439475 SERAC1Q96JX3 654 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 BTBD6Q96KE9 485 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 NOL6Q9H6R4 1146 aaKnown RBP10.64□□□□□ -0.71
MCF2L-216ENST00000439475 ZDHHC6Q9H6R6 413 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 GAREM1Q9H706 876 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 LRRC19Q9H756 370 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 FSCN3Q9NQT6 498 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.64□□□□□ -0.71
MCF2L-216ENST00000439475 DNAAF2Q9NVR5 837 aaKnown RBP10.64□□□□□ -0.71
MCF2L-216ENST00000439475 CWC15Q9P013 229 aaKnown RBP10.64□□□□□ -0.71
MCF2L-216ENST00000439475 RCOR3Q9P2K3 495 aaPredicted RBP10.64□□□□□ -0.71
MCF2L-216ENST00000439475 INTUQ9ULD6 942 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 PCDHB9Q9Y5E1 797 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 WASF2Q9Y6W5 498 aa10.64□□□□□ -0.71
MCF2L-216ENST00000439475 UPK3BL1B0FP48 263 aa10.63□□□□□ -0.71
MCF2L-216ENST00000439475 UPK3BL2E5RIL1 263 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms