RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 TUBBP07437 444 aa21.03■□□□□ 0.96
CHD3-204ENST00000439235 SRCP12931 536 aa21.03■□□□□ 0.96
CHD3-204ENST00000439235 PSMB4P28070 264 aa21.03■□□□□ 0.96
CHD3-204ENST00000439235 CD68P34810 354 aaPredicted RBP21.03■□□□□ 0.96
CHD3-204ENST00000439235 RPL21P46778 160 aaKnown RBP21.03■□□□□ 0.96
CHD3-204ENST00000439235 STK19P49842 368 aaPredicted RBP21.03■□□□□ 0.96
CHD3-204ENST00000439235 KCTD19Q17RG1 926 aaPredicted RBP21.03■□□□□ 0.96
CHD3-204ENST00000439235 NAIF1Q69YI7 327 aaPredicted RBP21.03■□□□□ 0.96
CHD3-204ENST00000439235 ALG1LQ6GMV1 187 aa21.03■□□□□ 0.96
CHD3-204ENST00000439235 TAB3Q8N5C8 712 aaPredicted RBP21.03■□□□□ 0.96
CHD3-204ENST00000439235 SH2D3CQ8N5H7 860 aa21.03■□□□□ 0.96
CHD3-204ENST00000439235 KDM1BQ8NB78 822 aa21.03■□□□□ 0.96
CHD3-204ENST00000439235 ISG20Q96AZ6 181 aaKnown RBP21.03■□□□□ 0.96
CHD3-204ENST00000439235 RPL10LQ96L21 214 aaKnown RBP21.03■□□□□ 0.96
CHD3-204ENST00000439235 FAM129AQ9BZQ8 928 aa21.03■□□□□ 0.96
CHD3-204ENST00000439235 SLC25A51Q9H1U9 297 aa21.03■□□□□ 0.96
CHD3-204ENST00000439235 GDF3Q9NR23 364 aa21.03■□□□□ 0.96
CHD3-204ENST00000439235 LHX3Q9UBR4 397 aa21.03■□□□□ 0.96
CHD3-204ENST00000439235 TPX2Q9ULW0 747 aaKnown RBP21.03■□□□□ 0.96
CHD3-204ENST00000439235 PLA2G4CQ9UP65 541 aa21.03■□□□□ 0.96
CHD3-204ENST00000439235 FCF1Q9Y324 198 aaKnown RBP21.03■□□□□ 0.96
CHD3-204ENST00000439235 TICRRQ7Z2Z1 1910 aa21.03■□□□□ 0.96
CHD3-204ENST00000439235 NUP205Q92621 2012 aa21.02■□□□□ 0.96
CHD3-204ENST00000439235 SMAPO00193 183 aa21.02■□□□□ 0.96
CHD3-204ENST00000439235 CTIFO43310 598 aaKnown RBP21.02■□□□□ 0.96
CHD3-204ENST00000439235 ANXA9O76027 345 aa21.02■□□□□ 0.96
CHD3-204ENST00000439235 SEC31AO94979 1220 aaKnown RBP21.02■□□□□ 0.96
CHD3-204ENST00000439235 METTL18O95568 372 aa21.02■□□□□ 0.96
CHD3-204ENST00000439235 MT-CO1P00395 513 aa21.02■□□□□ 0.96
CHD3-204ENST00000439235 ITIH2P19823 946 aa21.02■□□□□ 0.96
CHD3-204ENST00000439235 CES1P23141 567 aa21.02■□□□□ 0.96
CHD3-204ENST00000439235 IVDP26440 423 aa21.02■□□□□ 0.96
CHD3-204ENST00000439235 GALK1P51570 392 aa21.02■□□□□ 0.96
CHD3-204ENST00000439235 CAV1Q03135 178 aa21.02■□□□□ 0.96
CHD3-204ENST00000439235 MESP2Q0VG99 397 aa21.02■□□□□ 0.96
CHD3-204ENST00000439235 SEMA5AQ13591 1074 aa21.02■□□□□ 0.96
CHD3-204ENST00000439235 CUL1Q13616 776 aa21.02■□□□□ 0.96
CHD3-204ENST00000439235 C22orf39Q6P5X5 142 aa21.02■□□□□ 0.96
CHD3-204ENST00000439235 PGBD5Q8N414 524 aa21.02■□□□□ 0.96
CHD3-204ENST00000439235 PCDH20Q8N6Y1 951 aaKnown RBP21.02■□□□□ 0.96
CHD3-204ENST00000439235 TSEN2Q8NCE0 465 aaKnown RBP21.02■□□□□ 0.96
CHD3-204ENST00000439235 CYB5D2Q8WUJ1 264 aa21.02■□□□□ 0.96
CHD3-204ENST00000439235 ETNK1Q9HBU6 452 aa21.02■□□□□ 0.96
CHD3-204ENST00000439235 AAR2Q9Y312 384 aaKnown RBP21.02■□□□□ 0.96
CHD3-204ENST00000439235 MYOFQ9NZM1 2061 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 ESYT3A0FGR9 886 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 K7ERQ8 282 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 PSMD3O43242 534 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 ATP9BO43861 1147 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 IGSF6O95976 241 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 TNFRSF4P43489 277 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 LMAN1P49257 510 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 GEMP55040 296 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 MAXP61244 160 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 NSUN2Q08J23 767 aaKnown RBP eCLIP21.01■□□□□ 0.95
CHD3-204ENST00000439235 ELF2Q15723 593 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 RALGPS1Q5JS13 557 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 FAXCQ5TGI0 409 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 TXNDC11Q6PKC3 985 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 HOOK3Q86VS8 718 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 PPIL6Q8IXY8 311 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 SORCS1Q8WY21 1168 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 IMP4Q96G21 291 aaKnown RBP21.01■□□□□ 0.95
CHD3-204ENST00000439235 MRGPRX3Q96LB0 322 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 GDAP1L1Q96MZ0 367 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 ASB2Q96Q27 587 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 EIF2B3Q9NR50 452 aaKnown RBP21.01■□□□□ 0.95
CHD3-204ENST00000439235 GRHL1Q9NZI5 618 aa21.01■□□□□ 0.95
CHD3-204ENST00000439235 SHROOM3Q8TF72 1996 aa21■□□□□ 0.95
CHD3-204ENST00000439235 ERI2A8K979 691 aaKnown RBP21■□□□□ 0.95
CHD3-204ENST00000439235 F5H423 210 aaPredicted RBP21■□□□□ 0.95
CHD3-204ENST00000439235 MAN2B1O00754 1011 aa21■□□□□ 0.95
CHD3-204ENST00000439235 MUSKO15146 869 aa21■□□□□ 0.95
CHD3-204ENST00000439235 SMAD6O43541 496 aaKnown RBP21■□□□□ 0.95
CHD3-204ENST00000439235 GSRP00390 522 aa21■□□□□ 0.95
CHD3-204ENST00000439235 DRD1P21728 446 aa21■□□□□ 0.95
CHD3-204ENST00000439235 TNFRSF8P28908 595 aa21■□□□□ 0.95
CHD3-204ENST00000439235 MAGEA6P43360 314 aa21■□□□□ 0.95
CHD3-204ENST00000439235 MAPK8P45983 427 aa21■□□□□ 0.95
CHD3-204ENST00000439235 DSC2Q02487 901 aa21■□□□□ 0.95
CHD3-204ENST00000439235 GRSF1Q12849 480 aaKnown RBP eCLIP21■□□□□ 0.95
CHD3-204ENST00000439235 MORF4L2Q15014 288 aa21■□□□□ 0.95
CHD3-204ENST00000439235 MLF2Q15773 248 aaPredicted RBP21■□□□□ 0.95
CHD3-204ENST00000439235 SLC14A2Q15849 920 aa21■□□□□ 0.95
CHD3-204ENST00000439235 PTPRNQ16849 979 aa21■□□□□ 0.95
CHD3-204ENST00000439235 ACCSLQ4AC99 568 aa21■□□□□ 0.95
CHD3-204ENST00000439235 FNDC3BQ53EP0 1204 aaKnown RBP21■□□□□ 0.95
CHD3-204ENST00000439235 SLC44A4Q53GD3 710 aa21■□□□□ 0.95
CHD3-204ENST00000439235 FAM182AQ5T1J6 154 aa21■□□□□ 0.95
CHD3-204ENST00000439235 RNASEH2BQ5TBB1 312 aaKnown RBP21■□□□□ 0.95
CHD3-204ENST00000439235 CPT1BQ92523 772 aa21■□□□□ 0.95
CHD3-204ENST00000439235 NUDCD1Q96RS6 583 aa21■□□□□ 0.95
CHD3-204ENST00000439235 SEMA3CQ99985 751 aa21■□□□□ 0.95
CHD3-204ENST00000439235 HINFPQ9BQA5 517 aa21■□□□□ 0.95
CHD3-204ENST00000439235 EPC1Q9H2F5 836 aa21■□□□□ 0.95
CHD3-204ENST00000439235 SCUBE2Q9NQ36 999 aa21■□□□□ 0.95
CHD3-204ENST00000439235 VPS45Q9NRW7 570 aa21■□□□□ 0.95
CHD3-204ENST00000439235 ANAPC5Q9UJX4 755 aa21■□□□□ 0.95
CHD3-204ENST00000439235 SHOC2Q9UQ13 582 aa21■□□□□ 0.95
CHD3-204ENST00000439235 NPC1O15118 1278 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms