RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 BUD31P41223 144 aaPredicted RBP13.93□□□□□ -0.18
LRCH3-206ENST00000438796 ITIH4Q14624 930 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 RNASE12Q5GAN4 147 aaKnown RBP13.93□□□□□ -0.18
LRCH3-206ENST00000438796 C1orf167Q5SNV9 1468 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 TMEM138Q9NPI0 162 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 IRF8Q02556 426 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 FAAP100Q0VG06 881 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 KPNB1Q14974 876 aaKnown RBP13.93□□□□□ -0.18
LRCH3-206ENST00000438796 GCNT7Q6ZNI0 430 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 OR6Y1Q8NGX8 325 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 UGT2B28Q9BY64 529 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 REEP1Q9H902 201 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 NDRG2Q9UN36 371 aaKnown RBP13.93□□□□□ -0.18
LRCH3-206ENST00000438796 ACADSP16219 412 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 NEK3P51956 506 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 DMPKQ09013 629 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 TRAF3Q13114 568 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 ZIK1Q3SY52 487 aaPredicted RBP13.93□□□□□ -0.18
LRCH3-206ENST00000438796 PABPC1LQ4VXU2 614 aaKnown RBP13.93□□□□□ -0.18
LRCH3-206ENST00000438796 ZNF276Q8N554 614 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 PCDH20Q8N6Y1 951 aaKnown RBP13.93□□□□□ -0.18
LRCH3-206ENST00000438796 TP53INP1Q96A56 240 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 LDLRP01130 860 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 GP5P40197 560 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.93□□□□□ -0.18
LRCH3-206ENST00000438796 MOB2Q70IA6 237 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 ACTRT2Q8TDY3 377 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 MPP4Q96JB8 637 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 TRNT1Q96Q11 434 aaKnown RBP13.93□□□□□ -0.18
LRCH3-206ENST00000438796 ZNF780BQ9Y6R6 833 aa13.93□□□□□ -0.18
LRCH3-206ENST00000438796 CDC42BPAQ5VT25 1732 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 UBOX5O94941 541 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 TROAPQ12815 778 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 PRKD2Q9BZL6 878 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 ATP13A3Q9H7F0 1226 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 IMP3Q9NV31 184 aaKnown RBP13.92□□□□□ -0.18
LRCH3-206ENST00000438796 OR12D3Q9UGF7 316 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 DMGDHQ9UI17 866 aaKnown RBP13.92□□□□□ -0.18
LRCH3-206ENST00000438796 ANKRD63C9JTQ0 380 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 CCDC166P0CW27 439 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 CD52P31358 61 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 KCTD19Q17RG1 926 aaPredicted RBP13.92□□□□□ -0.18
LRCH3-206ENST00000438796 SNX32Q86XE0 403 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 KIAA0319LQ8IZA0 1049 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 RORBQ92753 470 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 OMA1Q96E52 524 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 DTNBP1Q96EV8 351 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 TTLL2Q9BWV7 592 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 BRD9Q9H8M2 597 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 DDX18Q9NVP1 670 aaKnown RBP13.92□□□□□ -0.18
LRCH3-206ENST00000438796 PSME2Q9UL46 239 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 ANKRD6Q9Y2G4 727 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 UNC13BO14795 1591 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 SF3B1O75533 1304 aaKnown RBP eCLIP13.92□□□□□ -0.182e-6■■■■■ 85.1
LRCH3-206ENST00000438796 CCNYL3P0C7X3 344 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 WARSP23381 471 aaKnown RBP13.92□□□□□ -0.18
LRCH3-206ENST00000438796 HTR1BP28222 390 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 HNRNPH1P31943 449 aaKnown RBP13.92□□□□□ -0.18
LRCH3-206ENST00000438796 TOB1P50616 345 aaPredicted RBP13.92□□□□□ -0.18
LRCH3-206ENST00000438796 MRPS6P82932 125 aaKnown RBP13.92□□□□□ -0.18
LRCH3-206ENST00000438796 FAM151BQ6UXP7 276 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 FAM183BPQ6ZVS7 135 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 DAW1Q8N136 415 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 CNPPD1Q9BV87 410 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 PCDH9Q9HC56 1237 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.92□□□□□ -0.18
LRCH3-206ENST00000438796 SGTAO43765 313 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 GJB1P08034 283 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 PMEPA1Q969W9 287 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 MYLPFQ96A32 169 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 LRRC39Q96DD0 335 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 CDRT15Q96T59 188 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 SEMA4AQ9H3S1 761 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 RNF17Q9BXT8 1623 aaKnown RBP13.92□□□□□ -0.18
LRCH3-206ENST00000438796 PEX11AO75192 247 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 ZMPSTE24O75844 475 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 RASGRP1O95267 797 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 PTPRAP18433 802 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 RCVRNP35243 200 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 MRPS35P82673 323 aaKnown RBP13.92□□□□□ -0.18
LRCH3-206ENST00000438796 NOMO2Q5JPE7 1267 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 PRMT9Q6P2P2 845 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 ZNF410Q86VK4 478 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 SVOPQ8N4V2 548 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 DEFB118Q96PH6 123 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 LIN7AO14910 233 aaPredicted RBP13.92□□□□□ -0.18
LRCH3-206ENST00000438796 SP3Q02447 781 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 MPPE1Q53F39 396 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 CNPY4Q8N129 248 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 RMND5BQ96G75 393 aaPredicted RBP13.92□□□□□ -0.18
LRCH3-206ENST00000438796 BTBD7Q9P203 1132 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 TRHDEQ9UKU6 1024 aa13.92□□□□□ -0.18
LRCH3-206ENST00000438796 DDX3XO00571 662 aaKnown RBP eCLIP13.91□□□□□ -0.182e-7■■■■■ 33.6
LRCH3-206ENST00000438796 DNTTP04053 509 aa13.91□□□□□ -0.18
LRCH3-206ENST00000438796 AXLP30530 894 aa13.91□□□□□ -0.18
LRCH3-206ENST00000438796 RPL9P32969 192 aaKnown RBP13.91□□□□□ -0.18
LRCH3-206ENST00000438796 RPL21P46778 160 aaKnown RBP13.91□□□□□ -0.18
LRCH3-206ENST00000438796 SUZ12Q15022 739 aaKnown RBP13.91□□□□□ -0.18
LRCH3-206ENST00000438796 APTXQ7Z2E3 356 aaKnown RBP13.91□□□□□ -0.18
LRCH3-206ENST00000438796 FAM129CQ86XR2 697 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms