RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 GJA8P48165 433 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 KYAT3Q6YP21 454 aaKnown RBP14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 ANKS3Q6ZW76 656 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 USP33Q8TEY7 942 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 CASP10Q92851 521 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 ATP2A3Q93084 1043 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 SEPT5Q99719 369 aaPredicted RBP14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 EBF4Q9BQW3 602 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 MLPHQ9BV36 600 aaPredicted RBP14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 TRIM4Q9C037 500 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 CRISPLD1Q9H336 500 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 SMOC2Q9H3U7 446 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 C11orf49Q9H6J7 331 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 OSER1Q9NX31 292 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 SCML2Q9UQR0 700 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 H7C4K7 107 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 BIRC5O15392 142 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 GLRA3O75311 464 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 VNN2O95498 520 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 LMNAP02545 664 aaKnown RBP14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 ENO1P06733 434 aaKnown RBP14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 ITGB8P26012 769 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 ALDH18A1P54886 795 aaKnown RBP14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 GPR17Q13304 367 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 FAM117BQ6P1L5 589 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 ARMC5Q96C12 935 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 HDAC11Q96DB2 347 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 RILPQ96NA2 401 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 GBA3Q9H227 469 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 CWH43Q9H720 699 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 PRDM5Q9NQX1 630 aaPredicted RBP14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 BFARQ9NZS9 450 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 LTBP2Q14767 1821 aa14.11□□□□□ -0.15
PTCHD3-201ENST00000438700 ARHGAP42A6NI28 874 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 PLIN3O60664 434 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 JCHAINP01591 159 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 GP5P40197 560 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 PPP2R5DQ14738 602 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 PCLAFQ15004 111 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 MGAT5BQ3V5L5 792 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 HSP90AA5PQ58FG0 334 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 MBLAC2Q68D91 279 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 ARHGAP36Q6ZRI8 547 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 STRA8Q7Z7C7 330 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 TREML1Q86YW5 311 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 C10orf107Q8IVU9 208 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 FAM161BQ96MY7 647 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 FBXO44Q9H4M3 255 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 LRRC40Q9H9A6 602 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 CHRAC1Q9NRG0 131 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 SNX15Q9NRS6 342 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 TMEM216Q9P0N5 145 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 GMIPQ9P107 970 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 CDY1Q9Y6F8 540 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 DFFAO00273 331 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 NCAM2O15394 837 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 HNRNPCL1O60812 293 aaKnown RBP14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 USP1O94782 785 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 FGF3P11487 239 aaPredicted RBP14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 MX2P20592 715 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 SERPINB6P35237 376 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 GALNT2Q10471 571 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 EIF4EBP2Q13542 120 aaPredicted RBP14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 SPANXN3Q5MJ09 141 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 MON1AQ86VX9 555 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 TNS4Q8IZW8 715 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 DCLK2Q8N568 766 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 SLC25A41Q8N5S1 370 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 SPPL2BQ8TCT7 592 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 ACMSDQ8TDX5 336 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 STMN2Q93045 179 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 VN1R3Q9BXE9 311 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 WWP1Q9H0M0 922 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 OCEL1Q9H607 264 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 CAB39LQ9H9S4 337 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 THAP1Q9NVV9 213 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 GREB1Q4ZG55 1949 aa14.1□□□□□ -0.15
PTCHD3-201ENST00000438700 ZCWPW2A0A1B0GU75 182 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 ADAM12O43184 909 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 PRKCGP05129 697 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 CSF2RAP15509 400 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 RPL17P18621 184 aaKnown RBP14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 RFC2P35250 354 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 HCAR3P49019 387 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 DUSP4Q13115 394 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 DLG2Q15700 870 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 KCTD11Q693B1 232 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 OTOP3Q7RTS5 596 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 ZNF778Q96MU6 729 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 CPNE1Q99829 537 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 ARHGEF38Q9NXL2 777 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 STX18Q9P2W9 335 aaKnown RBP14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 DNAJC16Q9Y2G8 782 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 ETS2P15036 469 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 PGM1P36871 562 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 SLC1A6P48664 564 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 DEFB103AP81534 67 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 KDSRQ06136 332 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms