RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 SERPINC1P01008 464 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 IL1AP01583 271 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 HNRNPA1P09651 372 aaKnown RBP eCLIP3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 MYZAPP0CAP1 466 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 ELF1P32519 619 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 TNFSF8P32971 234 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 KRT9P35527 623 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 PTPN9P43378 593 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 MPP1Q00013 466 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 SIM2Q14190 667 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 MAPRE1Q15691 268 aaKnown RBP3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 GPR68Q15743 365 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 NFIL3Q16649 462 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 LEXMQ3ZCV2 418 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 SYTL3Q4VX76 610 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 TBC1D9BQ66K14 1250 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 NCAPH2Q6IBW4 605 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 NAPEPLDQ6IQ20 393 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 PIM3Q86V86 326 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 TMC8Q8IU68 726 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 FAM217AQ8IXS0 508 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 TCP11L2Q8N4U5 519 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 LRRC57Q8N9N7 239 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 DNAAF1Q8NEP3 725 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 TNIP2Q8NFZ5 429 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 BICD2Q8TD16 824 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 HSPH1Q92598 858 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 LPAR1Q92633 364 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 CLSTN3Q9BQT9 956 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 B3GNT4Q9C0J1 378 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 INTS2Q9H0H0 1204 aaKnown RBP3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 LMAN2LQ9H0V9 348 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 MAP6D1Q9H9H5 199 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 ZBTB40Q9NUA8 1239 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 TBC1D14Q9P2M4 693 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 SEL1LQ9UBV2 794 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 CDH22Q9UJ99 828 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 C17orf113A0A1B0GUU1 675 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 TARSL2A2RTX5 802 aaKnown RBP3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 PER2O15055 1255 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 IGKV2-30P06310 120 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 MMP3P08254 477 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 DPP6P42658 865 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 GPR12P47775 334 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 RASSF2P50749 326 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 BLKP51451 505 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 PKP1Q13835 747 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 Q5PR19 223 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 AWAT2Q6E213 333 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 FAM180BQ6P0A1 224 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 PARM1Q6UWI2 310 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 IL20RBQ6UXL0 311 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 COLCA1Q6ZS62 124 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 SERPINA11Q86U17 422 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 GPSM1Q86YR5 675 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 KDM1BQ8NB78 822 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 ZCCHC10Q8TBK6 192 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 SLC25A28Q96A46 364 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 ZBTB9Q96C00 473 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 EYA3Q99504 573 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 FUZQ9BT04 418 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 UNC45AQ9H3U1 944 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 CXorf56Q9H5V9 222 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 BEX4Q9NWD9 120 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 IRAK4Q9NWZ3 460 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 NLKQ9UBE8 527 aa3.92□□□□□ -1.78
TRAPPC13-204ENST00000438419 A0A096LPK6 155 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 GAGE10A6NGK3 116 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 CEP104O60308 925 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 CD4P01730 458 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 PSG1P11464 419 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 NR1H2P55055 460 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 CAMK1Q14012 370 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 PTGR1Q14914 329 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 BAK1Q16611 211 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 ME3Q16798 604 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 PRTGQ2VWP7 1150 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 ZNF766Q5HY98 468 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 SLC9C2Q5TAH2 1124 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 FAAH2Q6GMR7 532 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 TRIM74Q86UV6 250 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 TRIM73Q86UV7 250 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 MON1AQ86VX9 555 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 CPXM2Q8N436 756 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 TMEM199Q8N511 208 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 HORMAD2Q8N7B1 307 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 PCYOX1LQ8NBM8 494 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 ZMIZ2Q8NF64 920 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 TMEM170AQ8WVE7 144 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 RUFY2Q8WXA3 655 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 ST8SIA4Q92187 359 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 ELP4Q96EB1 424 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 KLHL31Q9H511 634 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 PPP1R14DQ9NXH3 145 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 HCN3Q9P1Z3 774 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 TMEM98Q9Y2Y6 226 aa3.91□□□□□ -1.78
TRAPPC13-204ENST00000438419 ARHGAP10A1A4S6 786 aa3.9□□□□□ -1.78
TRAPPC13-204ENST00000438419 DDTLA6NHG4 134 aaPredicted RBP3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms