RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 PSMG2Q969U7 264 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 THOC1Q96FV9 657 aaKnown RBP26.07■■□□□ 1.76
CPNE1-216ENST00000437340 LRRC37BQ96QE4 947 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 PRKD2Q9BZL6 878 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 NT5MQ9NPB1 228 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 PRKAG2Q9UGJ0 569 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 HMGA1P17096 107 aaKnown RBP26.07■■□□□ 1.76
CPNE1-216ENST00000437340 OR1E1P30953 314 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 SKIV2L2P42285 1042 aaKnown RBP26.07■■□□□ 1.76
CPNE1-216ENST00000437340 HARS2P49590 506 aaKnown RBP26.07■■□□□ 1.76
CPNE1-216ENST00000437340 WNT3AP56704 352 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 SLC10A7Q0GE19 358 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 FSTL4Q6MZW2 842 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 FAM117BQ6P1L5 589 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 CNTN4Q8IWV2 1026 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 BADQ92934 168 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 AZIN2Q96A70 460 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 PABPC5Q96DU9 382 aaKnown RBP26.07■■□□□ 1.76
CPNE1-216ENST00000437340 TMEM169Q96HH4 297 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 HERC2P3Q9BVR0 1158 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 ATP13A1Q9HD20 1204 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 SNX15Q9NRS6 342 aa26.07■■□□□ 1.76
CPNE1-216ENST00000437340 IARS2Q9NSE4 1012 aaKnown RBP26.07■■□□□ 1.76
CPNE1-216ENST00000437340 PLIN3O60664 434 aa26.06■■□□□ 1.76
CPNE1-216ENST00000437340 EFCAB14O75071 495 aa26.06■■□□□ 1.76
CPNE1-216ENST00000437340 SEC24AO95486 1093 aa26.06■■□□□ 1.76
CPNE1-216ENST00000437340 SLC11A2P49281 568 aa26.06■■□□□ 1.76
CPNE1-216ENST00000437340 POU6F1Q14863 301 aa26.06■■□□□ 1.76
CPNE1-216ENST00000437340 SPOUT1Q5T280 376 aaKnown RBP26.06■■□□□ 1.76
CPNE1-216ENST00000437340 OTOP2Q7RTS6 562 aa26.06■■□□□ 1.76
CPNE1-216ENST00000437340 PLD4Q96BZ4 506 aa26.06■■□□□ 1.76
CPNE1-216ENST00000437340 ZNF778Q96MU6 729 aa26.06■■□□□ 1.76
CPNE1-216ENST00000437340 MECRQ9BV79 373 aa26.06■■□□□ 1.76
CPNE1-216ENST00000437340 NACA2Q9H009 215 aa26.06■■□□□ 1.76
CPNE1-216ENST00000437340 TRPM5Q9NZQ8 1165 aa26.06■■□□□ 1.76
CPNE1-216ENST00000437340 CHKBQ9Y259 395 aa26.06■■□□□ 1.76
CPNE1-216ENST00000437340 KIAA1671Q9BY89 1806 aa26.06■■□□□ 1.76
CPNE1-216ENST00000437340 BAIAP3O94812 1187 aa26.05■■□□□ 1.76
CPNE1-216ENST00000437340 MPOP05164 745 aa26.05■■□□□ 1.76
CPNE1-216ENST00000437340 PAMP19021 973 aa26.05■■□□□ 1.76
CPNE1-216ENST00000437340 TMPRSS15P98073 1019 aa26.05■■□□□ 1.76
CPNE1-216ENST00000437340 N4BP2L1Q5TBK1 243 aaPredicted RBP26.05■■□□□ 1.76
CPNE1-216ENST00000437340 TRMT2BQ96GJ1 504 aaKnown RBP26.05■■□□□ 1.76
CPNE1-216ENST00000437340 RC3H2Q9HBD1 1191 aaKnown RBP26.05■■□□□ 1.76
CPNE1-216ENST00000437340 EMCNQ9ULC0 261 aa26.05■■□□□ 1.76
CPNE1-216ENST00000437340 CFAP73A6NFT4 308 aa26.05■■□□□ 1.76
CPNE1-216ENST00000437340 BST1Q10588 318 aa26.05■■□□□ 1.76
CPNE1-216ENST00000437340 OVGP1Q12889 678 aa26.05■■□□□ 1.76
CPNE1-216ENST00000437340 CHI3L2Q15782 390 aa26.05■■□□□ 1.76
CPNE1-216ENST00000437340 SMAD1Q15797 465 aaKnown RBP26.05■■□□□ 1.76
CPNE1-216ENST00000437340 UGP2Q16851 508 aa26.05■■□□□ 1.76
CPNE1-216ENST00000437340 NLRP9Q7RTR0 991 aa26.05■■□□□ 1.76
CPNE1-216ENST00000437340 ZNF354CQ86Y25 554 aa26.05■■□□□ 1.76
CPNE1-216ENST00000437340 LGI2Q8N0V4 545 aa26.05■■□□□ 1.76
CPNE1-216ENST00000437340 TADA1Q96BN2 335 aa26.05■■□□□ 1.76
CPNE1-216ENST00000437340 ZNF599Q96NL3 588 aa26.05■■□□□ 1.76
CPNE1-216ENST00000437340 RANBP9Q96S59 729 aa26.05■■□□□ 1.76
CPNE1-216ENST00000437340 PRAMEF11O60813 436 aa26.04■■□□□ 1.76
CPNE1-216ENST00000437340 GSRP00390 522 aa26.04■■□□□ 1.76
CPNE1-216ENST00000437340 ALDH1A3P47895 512 aa26.04■■□□□ 1.76
CPNE1-216ENST00000437340 PPP3CCP48454 512 aa26.04■■□□□ 1.76
CPNE1-216ENST00000437340 FPGSQ05932 587 aa26.04■■□□□ 1.76
CPNE1-216ENST00000437340 PPIGQ13427 754 aaKnown RBP eCLIP26.04■■□□□ 1.765e-12■■□□□ 13.5
CPNE1-216ENST00000437340 CIR1Q86X95 450 aaPredicted RBP26.04■■□□□ 1.76
CPNE1-216ENST00000437340 KLHL5Q96PQ7 755 aa26.04■■□□□ 1.76
CPNE1-216ENST00000437340 ECT2Q9H8V3 914 aa26.04■■□□□ 1.76
CPNE1-216ENST00000437340 CYP4F11Q9HBI6 524 aa26.04■■□□□ 1.76
CPNE1-216ENST00000437340 TREX1Q9NSU2 369 aa26.04■■□□□ 1.76
CPNE1-216ENST00000437340 MTO1Q9Y2Z2 717 aaKnown RBP26.04■■□□□ 1.76
CPNE1-216ENST00000437340 YIPF1Q9Y548 306 aa26.04■■□□□ 1.76
CPNE1-216ENST00000437340 COCHO43405 550 aa26.03■■□□□ 1.76
CPNE1-216ENST00000437340 SIN3BO75182 1162 aa26.03■■□□□ 1.76
CPNE1-216ENST00000437340 SNNO75324 88 aaPredicted RBP26.03■■□□□ 1.76
CPNE1-216ENST00000437340 ATP5HO75947 161 aa26.03■■□□□ 1.76
CPNE1-216ENST00000437340 TOP3BO95985 862 aaKnown RBP26.03■■□□□ 1.76
CPNE1-216ENST00000437340 LAG3P18627 525 aa26.03■■□□□ 1.76
CPNE1-216ENST00000437340 ARCN1P48444 511 aaKnown RBP26.03■■□□□ 1.76
CPNE1-216ENST00000437340 POLD2P49005 469 aa26.03■■□□□ 1.76
CPNE1-216ENST00000437340 NCALDP61601 193 aa26.03■■□□□ 1.76
CPNE1-216ENST00000437340 OCRLQ01968 901 aa26.03■■□□□ 1.76
CPNE1-216ENST00000437340 CDK18Q07002 472 aa26.03■■□□□ 1.76
CPNE1-216ENST00000437340 ITKQ08881 620 aa26.03■■□□□ 1.76
CPNE1-216ENST00000437340 CCDC153Q494R4 210 aa26.03■■□□□ 1.76
CPNE1-216ENST00000437340 RABGAP1LQ5R372 815 aa26.03■■□□□ 1.76
CPNE1-216ENST00000437340 TMCO4Q5TGY1 634 aa26.03■■□□□ 1.76
CPNE1-216ENST00000437340 KIAA0930Q6ICG6 404 aaPredicted RBP26.03■■□□□ 1.76
CPNE1-216ENST00000437340 ERP27Q96DN0 273 aa26.03■■□□□ 1.76
CPNE1-216ENST00000437340 MYEOVQ96EZ4 313 aa26.03■■□□□ 1.76
CPNE1-216ENST00000437340 VPS39Q96JC1 886 aa26.03■■□□□ 1.76
CPNE1-216ENST00000437340 MYLK2Q9H1R3 596 aa26.03■■□□□ 1.76
CPNE1-216ENST00000437340 MAGEH1Q9H213 219 aa26.03■■□□□ 1.76
CPNE1-216ENST00000437340 RHOJQ9H4E5 214 aa26.03■■□□□ 1.76
CPNE1-216ENST00000437340 HEATR9A2RTY3 570 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 GJB5O95377 273 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 PROCP04070 461 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 MMP2P08253 660 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 CD86P42081 329 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 CDH4P55283 916 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 RAB33AQ14088 237 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 LBRQ14739 615 aaKnown RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms