RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 CDKL3Q8IVW4 592 aaPredicted RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 DEFB123Q8N688 67 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 TMEM102Q8N9M5 508 aaPredicted RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 FAM71DQ8N9W8 422 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 HJURPQ8NCD3 748 aaPredicted RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 CCNYQ8ND76 341 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 WFDC5Q8TCV5 224 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 BPIFB1Q8TDL5 484 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 DDI1Q8WTU0 396 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 DEPDC1BQ8WUY9 529 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 TFB1MQ8WVM0 346 aaKnown RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 ARHGEF2Q92974 986 aaKnown RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 IRF7Q92985 503 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 BHMTQ93088 406 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 HDAC11Q96DB2 347 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 OTUB2Q96DC9 234 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 RTP4Q96DX8 246 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 ASIC4Q96FT7 647 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 HMCESQ96FZ2 354 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 SPACA7Q96KW9 195 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 RHOVQ96L33 236 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 CCDC114Q96M63 670 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 NECTIN4Q96NY8 510 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 TSGA13Q96PP4 275 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 PNKPQ96T60 521 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 FAM83CQ9BQN1 747 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 TRIM51Q9BSJ1 452 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 UBE2ZQ9H832 354 aaPredicted RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 ZFP14Q9HCL3 533 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 DUS2Q9NX74 493 aaKnown RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 OBP2AQ9NY56 170 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 PLK2Q9NYY3 685 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 FEZ2Q9UHY8 353 aaPredicted RBP7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 CLEC4EQ9ULY5 219 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 GREB1Q4ZG55 1949 aa7.19□□□□□ -1.26
LSM3P3-201ENST00000436601 CHD7Q9P2D1 2997 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 A0A0D9SEW6 157 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 ESYT3A0FGR9 886 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 TLDC2A0PJX2 215 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 ILVBLA1L0T0 632 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 TARSL2A2RTX5 802 aaKnown RBP7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 CFAP69A5D8W1 941 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 OTOL1A6NHN0 477 aaPredicted RBP7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 ANHXE9PGG2 379 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 J3KR12 359 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 SGK1O00141 431 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 SLC9A3R1O14745 358 aaPredicted RBP7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 PPP1R12AO14974 1030 aaPredicted RBP7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 KCNN4O15554 427 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 MBTPS2O43462 519 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 BNIP3LO60238 219 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 RAMP2O60895 175 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 HEXIM1O94992 359 aaKnown RBP7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 LUC7L3O95232 432 aaKnown RBP7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 PEX11BO96011 259 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 KRT14P02533 472 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 ARSAP15289 507 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 KCNA5P22460 613 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 CCNCP24863 283 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 IVDP26440 423 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 RPL22P35268 128 aaKnown RBP7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 LIG3P49916 1009 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 YBEYP58557 167 aaPredicted RBP7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 GUCY2DQ02846 1103 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 GNA12Q03113 381 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 PTSQ03393 145 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 AP1B1Q10567 949 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 WASHC5Q12768 1159 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 SERINC3Q13530 473 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 PTK6Q13882 451 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 POLD3Q15054 466 aaPredicted RBP7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 DHCR24Q15392 516 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 TRIP13Q15645 432 aaPredicted RBP7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 ELF2Q15723 593 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 PARP15Q460N3 678 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 LY6G5CQ5SRR4 150 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 RNF219Q5W0B1 726 aaPredicted RBP7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 DUPD1Q68J44 220 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 TRIM68Q6AZZ1 485 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 GSTA5Q7RTV2 222 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 SETD3Q86TU7 594 aaPredicted RBP7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 CARNMT1Q8N4J0 409 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 PHC3Q8NDX5 983 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 OR7D4Q8NG98 312 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 GRK7Q8WTQ7 553 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 OSCP1Q8WVF1 389 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 HTR3CQ8WXA8 447 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 RSAD2Q8WXG1 361 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 PPM1EQ8WY54 764 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 SEC14L1Q92503 715 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 FGF14Q92915 247 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 E2F7Q96AV8 911 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 ELSPBP1Q96BH3 223 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 ALG14Q96F25 216 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 ZFYVE19Q96K21 471 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 LMLNQ96KR4 655 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 KXD1Q9BQD3 176 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 TRIM56Q9BRZ2 755 aaKnown RBP7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 ERP44Q9BS26 406 aa7.18□□□□□ -1.26
LSM3P3-201ENST00000436601 RPP25Q9BUL9 199 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms