RNA–Protein interactions for RNA: ENST00000434537.1

LINC01007-201, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 1 (best) BASIC

Gene LINC01007, Length 2,291 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-201ENST00000434537 CDH23Q9H251 3354 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 IQANK1A0A1B0GTG1 560 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 SDR42E2A6NKP2 422 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 FGF10O15520 208 aaPredicted RBP9.42□□□□□ -0.9
LINC01007-201ENST00000434537 MTSS1O43312 755 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 WFS1O76024 890 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 AP2A1O95782 977 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 JCHAINP01591 159 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 HAPLN1P10915 354 aaPredicted RBP9.42□□□□□ -0.9
LINC01007-201ENST00000434537 ATF6P18850 670 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 NFKB1P19838 968 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 ALDH7A1P49419 539 aaKnown RBP9.42□□□□□ -0.9
LINC01007-201ENST00000434537 SLC18A1P54219 525 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 SMAD1Q15797 465 aaKnown RBP9.42□□□□□ -0.9
LINC01007-201ENST00000434537 PSMD5Q16401 504 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 KCTD11Q693B1 232 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 TMCO2Q7Z6W1 182 aaPredicted RBP9.42□□□□□ -0.9
LINC01007-201ENST00000434537 MIB1Q86YT6 1006 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 ARHGAP18Q8N392 663 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 BANPQ8N9N5 519 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 PPHLN1Q8NEY8 458 aaKnown RBP9.42□□□□□ -0.9
LINC01007-201ENST00000434537 USP33Q8TEY7 942 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 SNRNP27Q8WVK2 155 aaKnown RBP9.42□□□□□ -0.9
LINC01007-201ENST00000434537 OXNAD1Q96HP4 312 aaPredicted RBP9.42□□□□□ -0.9
LINC01007-201ENST00000434537 RAB3IPQ96QF0 476 aaPredicted RBP9.42□□□□□ -0.9
LINC01007-201ENST00000434537 MLPHQ9BV36 600 aaPredicted RBP9.42□□□□□ -0.9
LINC01007-201ENST00000434537 VN1R3Q9BXE9 311 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 SLC39A8Q9C0K1 460 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 TXLNGQ9NUQ3 528 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.42□□□□□ -0.9
LINC01007-201ENST00000434537 UBP1Q9NZI7 540 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 IL1RAPL1Q9NZN1 696 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 SLC17A6Q9P2U8 582 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 VANGL2Q9ULK5 521 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 PHTF1Q9UMS5 762 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 COL4A6Q14031 1691 aa9.42□□□□□ -0.9
LINC01007-201ENST00000434537 ARHGAP42A6NI28 874 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 FAM159BA6NKW6 160 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 H7C4K7 107 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 C2CD2LO14523 706 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 MAFKO60675 156 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 ATP5HO75947 161 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 RTN3O95197 1032 aaPredicted RBP9.41□□□□□ -0.9
LINC01007-201ENST00000434537 MT-ND3P03897 115 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 GSTA2P09210 222 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 MLLT6P55198 1093 aaPredicted RBP9.41□□□□□ -0.9
LINC01007-201ENST00000434537 DNAJC3Q13217 504 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 STEAP4Q687X5 459 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 RGS9BPQ6ZS82 235 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 SH2D5Q6ZV89 423 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 THNSL2Q86YJ6 484 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 ATPAF2Q8N5M1 289 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 CNTD1Q8N815 330 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 TCP10LQ8TDR4 215 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 SPATA17Q96L03 361 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 TEKT5Q96M29 485 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 TOX2Q96NM4 488 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 PRKD2Q9BZL6 878 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 CWH43Q9H720 699 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 SSU72Q9NP77 194 aaKnown RBP9.41□□□□□ -0.9
LINC01007-201ENST00000434537 SLCO1B3Q9NPD5 702 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 TLR8Q9NR97 1041 aaKnown RBP9.41□□□□□ -0.9
LINC01007-201ENST00000434537 MOCS1Q9NZB8 636 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 SIRPGQ9P1W8 387 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 SLC17A7Q9P2U7 560 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 TRHDEQ9UKU6 1024 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 TMCC3Q9ULS5 477 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 MAGED2Q9UNF1 606 aaPredicted RBP9.41□□□□□ -0.9
LINC01007-201ENST00000434537 CHKBQ9Y259 395 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 ATP11BQ9Y2G3 1177 aa9.41□□□□□ -0.9
LINC01007-201ENST00000434537 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.4□□□□□ -0.9
LINC01007-201ENST00000434537 TRIM49D1C9J1S8 452 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 ZNF189O75820 626 aaPredicted RBP9.4□□□□□ -0.9
LINC01007-201ENST00000434537 EFEMP2O95967 443 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 PGAM1P18669 254 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 HTR7P34969 479 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 SMARCB1Q12824 385 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 BMPR2Q13873 1038 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 MS4A13Q5J8X5 152 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 C10orf120Q5SQS8 335 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 CFAP161Q6P656 301 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 CES3Q6UWW8 571 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 OTOP3Q7RTS5 596 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 RTL3Q8N8U3 475 aaKnown RBP9.4□□□□□ -0.9
LINC01007-201ENST00000434537 C1orf74Q96LT6 269 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 LRRC37BQ96QE4 947 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 VAT1Q99536 393 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 APOL2Q9BQE5 337 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 ZNF700Q9H0M5 742 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 LRMDAQ9H2I8 198 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 ZNF180Q9UJW8 692 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 TBX21Q9UL17 535 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 USH1CQ9Y6N9 552 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 HMX2A2RU54 273 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 TRIM64CA6NLI5 447 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 ALDH1A2O94788 518 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 ZWINTO95229 277 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 HMBSP08397 361 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 T-ENOLP0DO92 83 aa9.4□□□□□ -0.9
LINC01007-201ENST00000434537 SLC2A3P11169 496 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms