RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 FAM96AQ9H5X1 160 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 KCNK13Q9HB14 408 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 GLOD4Q9HC38 313 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 PLIN3O60664 434 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 HAUS5O94927 633 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 URODP06132 367 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 GRK2P25098 689 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 DNAJB1P25685 340 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 YWHAQP27348 245 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 PPM1AP35813 382 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 MNAT1P51948 309 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 ZBTB16Q05516 673 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 MPP3Q13368 585 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 UGP2Q16851 508 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 CERCAMQ5T4B2 595 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 N4BP2L1Q5TBK1 243 aaPredicted RBP12.13□□□□□ -0.47
CTCFL-209ENST00000433949 LCA5Q86VQ0 697 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 UMODL1-AS1Q8N2C9 162 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 SP7Q8TDD2 431 aaPredicted RBP12.13□□□□□ -0.47
CTCFL-209ENST00000433949 C2orf15Q8WU43 125 aaKnown RBP12.13□□□□□ -0.47
CTCFL-209ENST00000433949 SKA1Q96BD8 255 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 MFSD3Q96ES6 412 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 SEPT5Q99719 369 aaPredicted RBP12.13□□□□□ -0.47
CTCFL-209ENST00000433949 CLSTN3Q9BQT9 956 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 WWP1Q9H0M0 922 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 STN1Q9H668 368 aaKnown RBP12.13□□□□□ -0.47
CTCFL-209ENST00000433949 MRM3Q9HC36 420 aaKnown RBP12.13□□□□□ -0.47
CTCFL-209ENST00000433949 TLR8Q9NR97 1041 aaKnown RBP12.13□□□□□ -0.47
CTCFL-209ENST00000433949 HEY2Q9UBP5 337 aa12.13□□□□□ -0.47
CTCFL-209ENST00000433949 H7C4K7 107 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 ATP6V1G2O95670 118 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 EFEMP2O95967 443 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 MOCS2O96007 188 aaPredicted RBP12.12□□□□□ -0.47
CTCFL-209ENST00000433949 MYL2P10916 166 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 RHOQP17081 205 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 TARSP26639 723 aaKnown RBP12.12□□□□□ -0.47
CTCFL-209ENST00000433949 ERVFC1P60507 584 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 DUSP4Q13115 394 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 OLIG2Q13516 323 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 HNRNPDQ14103 355 aaKnown RBP12.12□□□□□ -0.47
CTCFL-209ENST00000433949 FASTKD1Q53R41 847 aaKnown RBP12.12□□□□□ -0.47
CTCFL-209ENST00000433949 HSP90AA5PQ58FG0 334 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 CES3Q6UWW8 571 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 WDR75Q8IWA0 830 aaKnown RBP12.12□□□□□ -0.47
CTCFL-209ENST00000433949 SREK1Q8WXA9 508 aaKnown RBP12.12□□□□□ -0.47
CTCFL-209ENST00000433949 BTN2A3PQ96KV6 586 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 SPATA17Q96L03 361 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 PBX4Q9BYU1 374 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 ZYG11BQ9C0D3 744 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 CRISPLD1Q9H336 500 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 SNX15Q9NRS6 342 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 MRPL17Q9NRX2 175 aaKnown RBP12.12□□□□□ -0.47
CTCFL-209ENST00000433949 C20orf96Q9NUD7 363 aaPredicted RBP12.12□□□□□ -0.47
CTCFL-209ENST00000433949 OSER1Q9NX31 292 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 MID2Q9UJV3 735 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 MYLKQ15746 1914 aa12.12□□□□□ -0.47
CTCFL-209ENST00000433949 CXCL14O95715 111 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 PTPN4P29074 926 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 POLD2P49005 469 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 PGFP49763 221 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 RENBPP51606 427 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 DSG1Q02413 1049 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 GPR17Q13304 367 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 TRIP4Q15650 581 aaPredicted RBP12.11□□□□□ -0.47
CTCFL-209ENST00000433949 CTC1Q2NKJ3 1217 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 MGAT5BQ3V5L5 792 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 PLPP4Q5VZY2 271 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 FSTL4Q6MZW2 842 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 OTOP3Q7RTS5 596 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 RNF168Q8IYW5 571 aaPredicted RBP12.11□□□□□ -0.47
CTCFL-209ENST00000433949 DCLK2Q8N568 766 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 PPHLN1Q8NEY8 458 aaKnown RBP12.11□□□□□ -0.47
CTCFL-209ENST00000433949 POF1BQ8WVV4 589 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 FBXO32Q969P5 355 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 CEP295NLQ96MC4 621 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 TCF25Q9BQ70 676 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 FSD1LQ9BXM9 530 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 CHRAC1Q9NRG0 131 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 TMEM248Q9NWD8 314 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 UBP1Q9NZI7 540 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 SLC17A6Q9P2U8 582 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 IPO11Q9UI26 975 aaKnown RBP12.11□□□□□ -0.47
CTCFL-209ENST00000433949 HAO1Q9UJM8 370 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 RPL26L1Q9UNX3 145 aaKnown RBP12.11□□□□□ -0.47
CTCFL-209ENST00000433949 XIRP2A4UGR9 3374 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 CHD5Q8TDI0 1954 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 EYSQ5T1H1 3165 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 IGLV3-10A0A075B6K4 115 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.11□□□□□ -0.47
CTCFL-209ENST00000433949 CCDC22O60826 627 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 PROCP04070 461 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 SERPINE1P05121 402 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 KRT16P08779 473 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 T-ENOLP0DO92 83 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 PAMP19021 973 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 SERPINB3P29508 390 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 KPNA1P52294 538 aaPredicted RBP12.11□□□□□ -0.47
CTCFL-209ENST00000433949 RING1Q06587 406 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 KRT72Q14CN4 511 aa12.11□□□□□ -0.47
CTCFL-209ENST00000433949 ARTNQ5T4W7 220 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms