RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 PBX2P40425 430 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 PGFP49763 221 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 RGS19P49795 217 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 RING1Q06587 406 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 OLIG2Q13516 323 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 RTP2Q5QGT7 225 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 FSTL4Q6MZW2 842 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 ARHGAP36Q6ZRI8 547 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 ANKS3Q6ZW76 656 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 C14orf80Q86SX3 495 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 WDR75Q8IWA0 830 aaKnown RBP13.03□□□□□ -0.32
DDX56-204ENST00000431640 DCLK2Q8N568 766 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 PHOSPHO2Q8TCD6 241 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 CLP1Q92989 425 aaKnown RBP13.03□□□□□ -0.32
DDX56-204ENST00000431640 MFSD3Q96ES6 412 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 IGSF21Q96ID5 467 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 CDK5RAP1Q96SZ6 601 aaKnown RBP13.03□□□□□ -0.32
DDX56-204ENST00000431640 MECRQ9BV79 373 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 PRKD2Q9BZL6 878 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 SLC25A51Q9H1U9 297 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 STN1Q9H668 368 aaKnown RBP13.03□□□□□ -0.32
DDX56-204ENST00000431640 SNX15Q9NRS6 342 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.03□□□□□ -0.32
DDX56-204ENST00000431640 UBP1Q9NZI7 540 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 GMIPQ9P107 970 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 HAO1Q9UJM8 370 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 NUDT5Q9UKK9 219 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 RPL26L1Q9UNX3 145 aaKnown RBP13.03□□□□□ -0.32
DDX56-204ENST00000431640 ANKRD6Q9Y2G4 727 aa13.03□□□□□ -0.32
DDX56-204ENST00000431640 YBX2Q9Y2T7 364 aaKnown RBP13.03□□□□□ -0.32
DDX56-204ENST00000431640 PLXNA3P51805 1871 aa13.02□□□□□ -0.32
DDX56-204ENST00000431640 SHROOM3Q8TF72 1996 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 IGLV3-10A0A075B6K4 115 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 LINC01553A4QN01 128 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 DRGXA6NNA5 263 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 TLL1O43897 1013 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 H2AFYO75367 372 aaKnown RBP13.02□□□□□ -0.33
DDX56-204ENST00000431640 PROCP04070 461 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 SERPINE1P05121 402 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 KRT16P08779 473 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 HAPLN1P10915 354 aaPredicted RBP13.02□□□□□ -0.33
DDX56-204ENST00000431640 CPB1P15086 417 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 TARSP26639 723 aaKnown RBP13.02□□□□□ -0.33
DDX56-204ENST00000431640 ADRA1AP35348 466 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 EFEMP1Q12805 493 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 MS4A13Q5J8X5 152 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 ARTNQ5T4W7 220 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 PIK3R6Q5UE93 754 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 MBLAC2Q68D91 279 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 RSPO2Q6UXX9 243 aaPredicted RBP13.02□□□□□ -0.33
DDX56-204ENST00000431640 ATAD1Q8NBU5 361 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 PPP4R1Q8TF05 950 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 SKA1Q96BD8 255 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 TSNARE1Q96NA8 513 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 ZNF558Q96NG5 402 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 PGLYRP2Q96PD5 576 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 RAD9AQ99638 391 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 APOL2Q9BQE5 337 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 FSD1LQ9BXM9 530 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 ARNT2Q9HBZ2 717 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 NOD2Q9HC29 1040 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 VPS45Q9NRW7 570 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 IARS2Q9NSE4 1012 aaKnown RBP13.02□□□□□ -0.33
DDX56-204ENST00000431640 MPP6Q9NZW5 540 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 BAIAP2L1Q9UHR4 511 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 EMCNQ9ULC0 261 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 SORCS3Q9UPU3 1222 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 INSL6Q9Y581 213 aa13.02□□□□□ -0.33
DDX56-204ENST00000431640 MYO16Q9Y6X6 1858 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 TBC1D4O60343 1298 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 WFS1O76024 890 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 COL6A2P12110 1019 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 CPA3P15088 417 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 LAG3P18627 525 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 CALB2P22676 271 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 NMBRP28336 390 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 SERPINB3P29508 390 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 SLC1A6P48664 564 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 GPR15P49685 360 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 PRKAA2P54646 552 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 YBEYP58557 167 aaPredicted RBP13.01□□□□□ -0.33
DDX56-204ENST00000431640 USP46P62068 366 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 TNK2Q07912 1038 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 ILF2Q12905 390 aaKnown RBP13.01□□□□□ -0.33
DDX56-204ENST00000431640 TBCCQ15814 346 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 CTC1Q2NKJ3 1217 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 MARC1Q5VT66 337 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 SDHAF4Q5VUM1 108 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 C16orf46Q6P387 395 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 RANBP10Q6VN20 620 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 ARID3BQ8IVW6 561 aaPredicted RBP13.01□□□□□ -0.33
DDX56-204ENST00000431640 ZNF683Q8IZ20 524 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 KIF2BQ8N4N8 673 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 IPMKQ8NFU5 416 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 SPATA22Q8NHS9 363 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 PIWIL2Q8TC59 973 aaKnown RBP13.01□□□□□ -0.33
DDX56-204ENST00000431640 AGAP2Q99490 1192 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 C17orf80Q9BSJ5 609 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 MCMBPQ9BTE3 642 aa13.01□□□□□ -0.33
DDX56-204ENST00000431640 ZBED2Q9BTP6 218 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms