RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 PRKRIP1Q9H875 184 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 ZNF304Q9HCX3 659 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 SPAG4Q9NPE6 437 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 ENTPD7Q9NQZ7 604 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 SNTG1Q9NSN8 517 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 DIAPH3Q9NSV4 1193 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 ANKEF1Q9NU02 776 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 SEPT11Q9NVA2 429 aaKnown RBP3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 IL1RAPL1Q9NZN1 696 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 ABI3Q9P2A4 366 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 VPS28Q9UK41 221 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 INTS6Q9UL03 887 aaKnown RBP3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 TNFSF13BQ9Y275 285 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 TTLL3Q9Y4R7 772 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 LYVE1Q9Y5Y7 322 aa3.36□□□□□ -1.87
HMGB1P27-201ENST00000431429 A0A0G2JK05 382 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 LRRC3CA6NJW4 275 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 FOXO6A8MYZ6 492 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 B8ZZF3 427 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 FAM157AC9JC47 383 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 GTPBP1O00178 669 aaKnown RBP3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 EBAG9O00559 213 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 PRRG2O14669 202 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 FIBPO43427 364 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 STRNO43815 780 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 TIPRLO75663 272 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 IGLV2-14P01704 120 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 EIF2S1P05198 315 aaKnown RBP3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 HOXB5P09067 269 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 FMO4P31512 558 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 TTKP33981 857 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 ARL3P36405 182 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 GARSP41250 739 aaKnown RBP3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 GABRB2P47870 512 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 ARSFP54793 590 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 SLC12A2P55011 1212 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 CREB5Q02930 508 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 CCNG2Q16589 344 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 ZXDCQ2QGD7 858 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 SYTL3Q4VX76 610 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 SERTAD4-AS1Q5TG53 156 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 ATG9BQ674R7 924 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 CYP20A1Q6UW02 462 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 ZNF66Q6ZN08 573 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 DEF8Q6ZN54 512 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 RRM2BQ7LG56 351 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 SLC46A3Q7Z3Q1 461 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 WDR5BQ86VZ2 330 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 CNTROBQ8N137 903 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 PNLDC1Q8NA58 520 aaKnown RBP3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 TMEM116Q8NCL8 245 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 CADM4Q8NFZ8 388 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 KAT2BQ92831 832 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 SNAPC3Q92966 411 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 ARHGEF2Q92974 986 aaKnown RBP3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 FAM149B1Q96BN6 582 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 INTS12Q96CB8 462 aaKnown RBP3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 KIF1BPQ96EK5 621 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 FAM120BQ96EK7 910 aaKnown RBP3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 TIGD1Q96MW7 591 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 AGAP2Q99490 1192 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 SDF4Q9BRK5 362 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 PCED1AQ9H1Q7 454 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 HIPK3Q9H422 1215 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 NKIRAS2Q9NYR9 191 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 A4GNTQ9UNA3 340 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 DMRT1Q9Y5R6 373 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 KCNE2Q9Y6J6 123 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 UNC13AQ9UPW8 1703 aa3.35□□□□□ -1.87
HMGB1P27-201ENST00000431429 SCRIBQ14160 1630 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 A0A1W2PRG0 241 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 ARHGAP10A1A4S6 786 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 FRMD3A2A2Y4 597 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 FAM90A8PA6NJQ4 464 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 SMIM22K7EJ46 135 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 BCAT2O15382 392 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 MSI1O43347 362 aaKnown RBP3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 LIASO43766 372 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 RAMP2O60895 175 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 CNOT3O75175 753 aaKnown RBP3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 GJB3O75712 270 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 ADRB2P07550 413 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 FAM90A13PP0C7W8 464 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 FAM90A24PP0C7X0 464 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 PTPN2P17706 415 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 EDN2P20800 178 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 IL11P20809 199 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 CHRNA5P30532 468 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 ACSL1P33121 698 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 PBX3P40426 434 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 SKIV2L2P42285 1042 aaKnown RBP3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 CYP2J2P51589 502 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 INHBCP55103 352 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 NLRP5P59047 1200 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 KLF10Q13118 480 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 AIMP2Q13155 320 aaKnown RBP3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 SHBQ15464 509 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 GSTA3Q16772 222 aa3.34□□□□□ -1.87
HMGB1P27-201ENST00000431429 ALG11Q2TAA5 492 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms