RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 GATAD2AQ86YP4 633 aa12.76□□□□□ -0.37
SMPD4-204ENST00000430682 CHCHD4Q8N4Q1 142 aa12.76□□□□□ -0.37
SMPD4-204ENST00000430682 OR6K2Q8NGY2 324 aa12.76□□□□□ -0.37
SMPD4-204ENST00000430682 VCPIP1Q96JH7 1222 aa12.76□□□□□ -0.37
SMPD4-204ENST00000430682 SERAC1Q96JX3 654 aa12.76□□□□□ -0.37
SMPD4-204ENST00000430682 TM6SF2Q9BZW4 377 aa12.76□□□□□ -0.37
SMPD4-204ENST00000430682 AASDHPPTQ9NRN7 309 aa12.76□□□□□ -0.37
SMPD4-204ENST00000430682 TOR4AQ9NXH8 423 aa12.76□□□□□ -0.37
SMPD4-204ENST00000430682 IL36AQ9UHA7 158 aa12.76□□□□□ -0.37
SMPD4-204ENST00000430682 ZFR2Q9UPR6 939 aaKnown RBP12.76□□□□□ -0.37
SMPD4-204ENST00000430682 COL5A1P20908 1838 aaPredicted RBP12.76□□□□□ -0.37
SMPD4-204ENST00000430682 A0A1B0GTQ1 180 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 SLC7A4O43246 635 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 SPINT1O43278 529 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 KDELR3O43731 214 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 CREB3O43889 395 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 RNGTTO60942 597 aaKnown RBP12.75□□□□□ -0.37
SMPD4-204ENST00000430682 GZMAP12544 262 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 TCF4P15884 667 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 PRLRP16471 622 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 EPHB2P29323 1055 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 DNA2P51530 1060 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 SLC20A2Q08357 652 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 KLHL30Q0D2K2 578 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 POLD3Q15054 466 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-204ENST00000430682 ZSCAN23Q3MJ62 389 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 ATXN7L2Q5T6C5 722 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-204ENST00000430682 SEL1L3Q68CR1 1132 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 IL27RAQ6UWB1 636 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 ADAT2Q7Z6V5 191 aaKnown RBP12.75□□□□□ -0.37
SMPD4-204ENST00000430682 TRIM69Q86WT6 500 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 PCDH20Q8N6Y1 951 aaKnown RBP12.75□□□□□ -0.37
SMPD4-204ENST00000430682 RTL3Q8N8U3 475 aaKnown RBP12.75□□□□□ -0.37
SMPD4-204ENST00000430682 SETD7Q8WTS6 366 aaKnown RBP12.75□□□□□ -0.37
SMPD4-204ENST00000430682 HMCESQ96FZ2 354 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 MYOCQ99972 504 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 EDEM3Q9BZQ6 932 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 MAGEH1Q9H213 219 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 KDM4CQ9H3R0 1056 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 PCDHGB2Q9Y5G2 931 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 ZFYVE26Q68DK2 2539 aa12.75□□□□□ -0.37
SMPD4-204ENST00000430682 A0A1W2PQU0 124 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 TLR4O00206 839 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 SLC31A1O15431 190 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 RAMP2O60895 175 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 PRNPP04156 253 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 ATXN1LP0C7T5 689 aaKnown RBP12.74□□□□□ -0.37
SMPD4-204ENST00000430682 CCDC172P0C7W6 258 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 FTH1P19P0C7X4 201 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 PSMA2P25787 234 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 ABL2P42684 1182 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 NXPH1P58417 271 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 BNIP3Q12983 259 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 FGL2Q14314 439 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 ZNF284Q2VY69 593 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 FIGNQ5HY92 759 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 EFHC2Q5JST6 749 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 NAPEPLDQ6IQ20 393 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 KDM7AQ6ZMT4 941 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 ERN2Q76MJ5 926 aaKnown RBP12.74□□□□□ -0.37
SMPD4-204ENST00000430682 PARS2Q7L3T8 475 aaKnown RBP12.74□□□□□ -0.37
SMPD4-204ENST00000430682 RAB44Q7Z6P3 723 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-204ENST00000430682 PRPF39Q86UA1 669 aaKnown RBP12.74□□□□□ -0.37
SMPD4-204ENST00000430682 TP53INP2Q8IXH6 220 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 RHBDD1Q8TEB9 315 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 CPLX3Q8WVH0 158 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 GATA6Q92908 595 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 ISG20Q96AZ6 181 aaKnown RBP12.74□□□□□ -0.37
SMPD4-204ENST00000430682 KCTD15Q96SI1 283 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-204ENST00000430682 HEPHQ9BQS7 1158 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 SNRNP25Q9BV90 132 aaKnown RBP12.74□□□□□ -0.37
SMPD4-204ENST00000430682 HDAC8Q9BY41 377 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 CEP44Q9C0F1 390 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 ISCUQ9H1K1 167 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 ZDHHC6Q9H6R6 413 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 FZD3Q9NPG1 666 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 PARVAQ9NVD7 372 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 IFNKQ9P0W0 207 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 HECAQ9UBI9 543 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-204ENST00000430682 CNOT8Q9UFF9 292 aaKnown RBP12.74□□□□□ -0.37
SMPD4-204ENST00000430682 PCSK1NQ9UHG2 260 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 GGT7Q9UJ14 662 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 ASXL3Q9C0F0 2248 aa12.74□□□□□ -0.37
SMPD4-204ENST00000430682 APC2O95996 2303 aa12.73□□□□□ -0.37
SMPD4-204ENST00000430682 WASH4PA8MWX3 477 aa12.73□□□□□ -0.37
SMPD4-204ENST00000430682 RASA4BC9J798 803 aa12.73□□□□□ -0.37
SMPD4-204ENST00000430682 INSIG1O15503 277 aa12.73□□□□□ -0.37
SMPD4-204ENST00000430682 RASA4O43374 803 aa12.73□□□□□ -0.37
SMPD4-204ENST00000430682 PCDHGA12O60330 932 aa12.73□□□□□ -0.37
SMPD4-204ENST00000430682 KRT37O76014 449 aa12.73□□□□□ -0.37
SMPD4-204ENST00000430682 ITIH2P19823 946 aa12.73□□□□□ -0.37
SMPD4-204ENST00000430682 MIPP30301 263 aa12.73□□□□□ -0.37
SMPD4-204ENST00000430682 CCT8P50990 548 aa12.73□□□□□ -0.37
SMPD4-204ENST00000430682 UBASH3AP57075 661 aa12.73□□□□□ -0.37
SMPD4-204ENST00000430682 C21orf59P57076 290 aa12.73□□□□□ -0.37
SMPD4-204ENST00000430682 SERINC3Q13530 473 aa12.73□□□□□ -0.37
SMPD4-204ENST00000430682 TMEM259Q4ZIN3 620 aa12.73□□□□□ -0.37
SMPD4-204ENST00000430682 TXNRD3NBQ6F5E7 133 aa12.73□□□□□ -0.37
SMPD4-204ENST00000430682 KANSL1Q7Z3B3 1105 aa12.73□□□□□ -0.37
SMPD4-204ENST00000430682 GLRX5Q86SX6 157 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms