RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 CLDN2P57739 230 aa19■□□□□ 0.63
AC004540.1-202ENST00000430548 UBE2HP62256 183 aa19■□□□□ 0.63
AC004540.1-202ENST00000430548 DRAP1Q14919 205 aaPredicted RBP19■□□□□ 0.63
AC004540.1-202ENST00000430548 HS1BP3Q53T59 392 aa19■□□□□ 0.63
AC004540.1-202ENST00000430548 MANEALQ5VSG8 457 aa19■□□□□ 0.63
AC004540.1-202ENST00000430548 DCP2Q8IU60 420 aaKnown RBP19■□□□□ 0.63
AC004540.1-202ENST00000430548 FAM114A1Q8IWE2 563 aa19■□□□□ 0.63
AC004540.1-202ENST00000430548 BMFQ96LC9 184 aa19■□□□□ 0.63
AC004540.1-202ENST00000430548 ZYG11BQ9C0D3 744 aa19■□□□□ 0.63
AC004540.1-202ENST00000430548 USP29Q9HBJ7 922 aa19■□□□□ 0.63
AC004540.1-202ENST00000430548 NEU3Q9UQ49 428 aa19■□□□□ 0.63
AC004540.1-202ENST00000430548 PCDHB1Q9Y5F3 818 aa19■□□□□ 0.63
AC004540.1-202ENST00000430548 FADS3Q9Y5Q0 445 aa19■□□□□ 0.63
AC004540.1-202ENST00000430548 HS3ST3A1Q9Y663 406 aa19■□□□□ 0.63
AC004540.1-202ENST00000430548 RP1P56715 2156 aa18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 C1QL1O75973 258 aa18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 DXOO77932 396 aaKnown RBP18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 ENDOD1O94919 500 aa18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 PCDH8O95206 1070 aa18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 ALPPL2P10696 532 aa18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 ACTN2P35609 894 aa18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 CCNHP51946 323 aaPredicted RBP18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 RPS21P63220 83 aaKnown RBP18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 NOMO3P69849 1222 aa18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 NRG1Q02297 640 aaPredicted RBP18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 GNA12Q03113 381 aa18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 SLC20A2Q08357 652 aa18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 RAPGEF1Q13905 1077 aa18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 VWA3BQ502W6 1294 aa18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 PARS2Q7L3T8 475 aaKnown RBP18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 LSM14AQ8ND56 463 aaKnown RBP18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 EPS8L1Q8TE68 723 aa18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 VOPP1Q96AW1 172 aa18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 APOLD1Q96LR9 279 aa18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 CFAP57Q96MR6 1250 aa18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 FCRL3Q96P31 734 aaPredicted RBP18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 TUBGCP2Q9BSJ2 902 aa18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 ATP13A1Q9HD20 1204 aa18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 RAI2Q9Y5P3 530 aa18.99■□□□□ 0.63
AC004540.1-202ENST00000430548 SPTY2D1-AS1A0A0U1RR47 76 aa18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 POM121BA6NF01 834 aa18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 EIF4E1BA6NMX2 242 aaKnown RBP18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 SCAMP1O15126 338 aa18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 RAD51BO15315 384 aa18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 OPA1O60313 960 aa18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 PRKCSHP14314 528 aaPredicted RBP18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 NME1P15531 152 aaKnown RBP18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 L1CAMP32004 1257 aa18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 HNRNPKP61978 463 aaKnown RBP eCLIP18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 TLE3Q04726 772 aa18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 FZD2Q14332 565 aa18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 C2CD6Q53TS8 623 aa18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 KLHDC7AQ5VTJ3 777 aa18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 KDM7AQ6ZMT4 941 aa18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 Q6ZSR6 202 aa18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 PTAR1Q7Z6K3 402 aaPredicted RBP18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 NOP9Q86U38 636 aaKnown RBP18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 FAM131BQ86XD5 332 aa18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 PLPP6Q8IY26 295 aa18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 ZNF548Q8NEK5 533 aaPredicted RBP18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 ISG20Q96AZ6 181 aaKnown RBP18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 KLF6Q99612 283 aaPredicted RBP18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 HEPHQ9BQS7 1158 aa18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 DUSP23Q9BVJ7 150 aa18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 SLC17A9Q9BYT1 436 aa18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 ANKRD36A6QL64 1941 aa18.98■□□□□ 0.63
AC004540.1-202ENST00000430548 F8VZ95 297 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 K7ESM1 405 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 SRGAP2O75044 1071 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 CSF2P04141 144 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 UCHL3P15374 230 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 DPCR1Q3MIW9 517 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 CARD16Q5EG05 197 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 TMC6Q7Z403 805 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 PARGQ86W56 976 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 SPACA3Q8IXA5 215 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 MSANTD4Q8NCY6 345 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 DENND6BQ8NEG7 585 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 HIC2Q96JB3 615 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 LENG8Q96PV6 779 aaPredicted RBP18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 DEPDC7Q96QD5 511 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 C1QTNF2Q9BXJ5 285 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 PDCL3Q9H2J4 239 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 RETREG1Q9H6L5 497 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 DNAJC28Q9NX36 388 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 FCF1Q9Y324 198 aaKnown RBP18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 KIF26BQ2KJY2 2108 aa18.97■□□□□ 0.63
AC004540.1-202ENST00000430548 TEX51A0A1B0GUA7 166 aa18.96■□□□□ 0.63
AC004540.1-202ENST00000430548 NEMP2A6NFY4 417 aa18.96■□□□□ 0.63
AC004540.1-202ENST00000430548 GOLGA8SH3BPF8 625 aa18.96■□□□□ 0.63
AC004540.1-202ENST00000430548 RIOK3O14730 519 aaKnown RBP18.96■□□□□ 0.63
AC004540.1-202ENST00000430548 SPINT1O43278 529 aa18.96■□□□□ 0.63
AC004540.1-202ENST00000430548 ERCC5P28715 1186 aaPredicted RBP18.96■□□□□ 0.63
AC004540.1-202ENST00000430548 ABL2P42684 1182 aa18.96■□□□□ 0.63
AC004540.1-202ENST00000430548 RABIFP47224 123 aa18.96■□□□□ 0.63
AC004540.1-202ENST00000430548 TPD52L1Q16890 204 aaPredicted RBP18.96■□□□□ 0.63
AC004540.1-202ENST00000430548 TAF3Q5VWG9 929 aa18.96■□□□□ 0.63
AC004540.1-202ENST00000430548 ZCCHC8Q6NZY4 707 aaKnown RBP18.96■□□□□ 0.63
AC004540.1-202ENST00000430548 NLRP14Q86W24 1093 aa18.96■□□□□ 0.63
AC004540.1-202ENST00000430548 DRC7Q8IY82 874 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms