RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 A0A1W2PR77 199 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 TBC1D3FA6NER0 549 aaPredicted RBP18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 TBC1D3LB9A6J9 549 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 FGF10O15520 208 aaPredicted RBP18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 PRNPP04156 253 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 TBC1D3HP0C7X1 549 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 MAT2AP31153 395 aaKnown RBP18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 PCK1P35558 622 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 RACK1P63244 317 aaKnown RBP18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 ATXN7L2Q5T6C5 722 aaPredicted RBP18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 AFMIDQ63HM1 303 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 TBC1D3GQ6DHY5 549 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 TBC1D3CQ6IPX1 549 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 RFX8Q6ZV50 586 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 ARHGAP12Q8IWW6 846 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 TP53INP2Q8IXH6 220 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 TBC1D3Q8IZP1 549 aaPredicted RBP18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 CELF6Q96J87 481 aaKnown RBP18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 CCDC114Q96M63 670 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 CAMK1GQ96NX5 476 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 NUP85Q9BW27 656 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 PACSIN1Q9BY11 444 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 GAREM1Q9H706 876 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 PDFQ9HBH1 243 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 MRPL47Q9HD33 250 aaKnown RBP18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 MFHAS1Q9Y4C4 1052 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 TPRP12270 2363 aaKnown RBP18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 DOCK9Q9BZ29 2069 aa18.42■□□□□ 0.54
SSR4P1-202ENST00000429427 FRYQ5TBA9 3013 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 PCNX2A6NKB5 2137 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 CABIN1Q9Y6J0 2220 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 EEF2KO00418 725 aaKnown RBP18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 KCNK3O14649 394 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 PRPSAP2O60256 369 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 RNF8O76064 485 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 TMCC1O94876 653 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 TPM3P06753 285 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 CEACAM1P13688 526 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 HTR7P34969 479 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 CTSKP43235 329 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 DNA2P51530 1060 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 YBEYP58557 167 aaPredicted RBP18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 SLC25A11Q02978 314 aaKnown RBP18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 DPYSQ14117 519 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 SMTNL2Q2TAL5 461 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 PARP15Q460N3 678 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 CCDC122Q5T0U0 273 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 PARS2Q7L3T8 475 aaKnown RBP18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 VPS36Q86VN1 386 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 TRIM69Q86WT6 500 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 PLPP6Q8IY26 295 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 NIPA2Q8N8Q9 360 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 HEPHQ9BQS7 1158 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 HDAC8Q9BY41 377 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 KDM4CQ9H3R0 1056 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 CATSPERBQ9H7T0 1116 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 CWC15Q9P013 229 aaKnown RBP18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 FARP1Q9Y4F1 1045 aaPredicted RBP18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 TMEM131Q92545 1883 aa18.41■□□□□ 0.54
SSR4P1-202ENST00000429427 J3KR12 359 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 VILLO15195 856 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 SPINT1O43278 529 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 CBFA2T2O43439 604 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 BUB1O43683 1085 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 SH3BP5O60239 455 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 GSRP00390 522 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 DESP17661 470 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 ERCC2P18074 760 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 ITGB7P26010 798 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 PMLP29590 882 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 RECQLP46063 649 aaPredicted RBP18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 DPYSL2Q16555 572 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 PPP6R3Q5H9R7 873 aaPredicted RBP18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 ERN2Q76MJ5 926 aaKnown RBP18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 PSTKQ8IV42 348 aaKnown RBP18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 OR2AP1Q8NGE2 309 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 OR8K1Q8NGG5 319 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 SERAC1Q96JX3 654 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 SLC39A8Q9C0K1 460 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 ZDHHC6Q9H6R6 413 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 PREBQ9HCU5 417 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 ABHD10Q9NUJ1 306 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 LHX3Q9UBR4 397 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 ANAPC7Q9UJX3 599 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 HPCAL4Q9UM19 191 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 ZFR2Q9UPR6 939 aaKnown RBP18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 WASF3Q9UPY6 502 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 CA5BQ9Y2D0 317 aa18.4■□□□□ 0.54
SSR4P1-202ENST00000429427 AKAP13Q12802 2813 aa18.39■□□□□ 0.53
SSR4P1-202ENST00000429427 SPAARA0A1B0GVQ0 90 aa18.39■□□□□ 0.53
SSR4P1-202ENST00000429427 EIF3CLB5ME19 914 aaKnown RBP18.39■□□□□ 0.53
SSR4P1-202ENST00000429427 H0Y8X5 98 aa18.39■□□□□ 0.53
SSR4P1-202ENST00000429427 RNGTTO60942 597 aaKnown RBP18.39■□□□□ 0.53
SSR4P1-202ENST00000429427 CBFA2T3O75081 653 aa18.39■□□□□ 0.53
SSR4P1-202ENST00000429427 MFAP3LO75121 409 aa18.39■□□□□ 0.53
SSR4P1-202ENST00000429427 RARAP10276 462 aa18.39■□□□□ 0.53
SSR4P1-202ENST00000429427 ADKP55263 362 aaKnown RBP18.39■□□□□ 0.53
SSR4P1-202ENST00000429427 GEMIN4P57678 1058 aaKnown RBP18.39■□□□□ 0.53
SSR4P1-202ENST00000429427 SLC14A1Q13336 389 aa18.39■□□□□ 0.53
SSR4P1-202ENST00000429427 MAPK8IP2Q13387 824 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms