RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 DENND5AQ6IQ26 1287 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 ZYG11AQ6WRX3 759 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 UMODL1-AS1Q8N2C9 162 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.88□□□□□ -0.19
THBS3-202ENST00000428962 ATP6V0D2Q8N8Y2 350 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 RBM15BQ8NDT2 890 aaKnown RBP13.88□□□□□ -0.19
THBS3-202ENST00000428962 SLC39A13Q96H72 371 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 ACE2Q9BYF1 805 aaPredicted RBP13.88□□□□□ -0.19
THBS3-202ENST00000428962 ZYG11BQ9C0D3 744 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 CDH19Q9H159 772 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 TASP1Q9H6P5 420 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 PNPOQ9NVS9 261 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 ZNF358Q9NW07 568 aa13.88□□□□□ -0.19
THBS3-202ENST00000428962 OR6C75A6NL08 312 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 PMPCBO75439 489 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 RTN3O95197 1032 aaPredicted RBP13.87□□□□□ -0.19
THBS3-202ENST00000428962 CRABP2P29373 138 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 ELF1P32519 619 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 ABCG1P45844 678 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 PGFP49763 221 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 PSEN1P49768 467 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 HNRNPDQ14103 355 aaKnown RBP13.87□□□□□ -0.19
THBS3-202ENST00000428962 UBAP2LQ14157 1087 aaKnown RBP13.87□□□□□ -0.19
THBS3-202ENST00000428962 KPNB1Q14974 876 aaKnown RBP13.87□□□□□ -0.19
THBS3-202ENST00000428962 DLG2Q15700 870 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 CCDC6Q16204 474 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 VARS2Q5ST30 1063 aaKnown RBP13.87□□□□□ -0.19
THBS3-202ENST00000428962 PIK3R6Q5UE93 754 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 NET1Q7Z628 596 aaPredicted RBP13.87□□□□□ -0.19
THBS3-202ENST00000428962 SLC25A51Q9H1U9 297 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 VPS45Q9NRW7 570 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 TMEM248Q9NWD8 314 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 MPP6Q9NZW5 540 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 PRG3Q9Y2Y8 225 aaPredicted RBP13.87□□□□□ -0.19
THBS3-202ENST00000428962 NYNRINQ9P2P1 1898 aaKnown RBP13.87□□□□□ -0.19
THBS3-202ENST00000428962 CCDC78A2IDD5 438 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 HEATR9A2RTY3 570 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 F8W8V4 182 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 H0Y3Z8 333 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 GOLGA8TH3BQL2 631 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 B4GALT3O60512 393 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 TM7SF2O76062 418 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 LUC7L3O95232 432 aaKnown RBP13.87□□□□□ -0.19
THBS3-202ENST00000428962 VAPBO95292 243 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 RPSAP08865 295 aaKnown RBP13.87□□□□□ -0.19
THBS3-202ENST00000428962 RAB10P61026 200 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 MTA1Q13330 715 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 ZRSR2Q15696 482 aaKnown RBP13.87□□□□□ -0.19
THBS3-202ENST00000428962 TSNAXIP1Q2TAA8 658 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 TRMT5Q32P41 509 aaKnown RBP13.87□□□□□ -0.19
THBS3-202ENST00000428962 CTXN3Q4LDR2 81 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 ARTNQ5T4W7 220 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 LIPMQ5VYY2 423 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 ZNF280DQ6N043 979 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 KIAA0408Q6ZU52 694 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 MAVSQ7Z434 540 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 C14orf80Q86SX3 495 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 RTN4RL1Q86UN2 441 aaPredicted RBP13.87□□□□□ -0.19
THBS3-202ENST00000428962 SCUBE1Q8IWY4 988 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 CALML6Q8TD86 181 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 LINC01599Q8WXQ3 324 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 N4BP2L2Q92802 583 aaPredicted RBP13.87□□□□□ -0.19
THBS3-202ENST00000428962 ZNF419Q96HQ0 510 aaPredicted RBP13.87□□□□□ -0.19
THBS3-202ENST00000428962 SCYL1Q96KG9 808 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 MRGPRX2Q96LB1 330 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 FAM161BQ96MY7 647 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 TSEN34Q9BSV6 310 aaKnown RBP13.87□□□□□ -0.19
THBS3-202ENST00000428962 PRDM5Q9NQX1 630 aaPredicted RBP13.87□□□□□ -0.19
THBS3-202ENST00000428962 NDFIP2Q9NV92 336 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 OXSMQ9NWU1 459 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 OSER1Q9NX31 292 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 TMEM161AQ9NX61 479 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 CLIC5Q9NZA1 410 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 GMIPQ9P107 970 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 NUDT5Q9UKK9 219 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 ACOT9Q9Y305 439 aa13.87□□□□□ -0.19
THBS3-202ENST00000428962 A0A087X1B8 175 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 AHSGP02765 367 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 STMN1P16949 149 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 YWHAQP27348 245 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 ARCN1P48444 511 aaKnown RBP13.86□□□□□ -0.19
THBS3-202ENST00000428962 COPAP53621 1224 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 WNT3AP56704 352 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 SP3Q02447 781 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 SEPT6Q14141 434 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 RCN1Q15293 331 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 TAF11Q15544 211 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 TRIP4Q15650 581 aaPredicted RBP13.86□□□□□ -0.19
THBS3-202ENST00000428962 DDR2Q16832 855 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 KHDC1Q4VXA5 237 aaKnown RBP13.86□□□□□ -0.19
THBS3-202ENST00000428962 MAP3K21Q5TCX8 1036 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 METTL21CQ5VZV1 264 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 TRAF7Q6Q0C0 670 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 RANBP10Q6VN20 620 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 ABI1Q8IZP0 508 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 TDRD5Q8NAT2 981 aaKnown RBP13.86□□□□□ -0.19
THBS3-202ENST00000428962 KCNV2Q8TDN2 545 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 STON2Q8WXE9 905 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 FBXO32Q969P5 355 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 CMTM5Q96DZ9 223 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms