RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 AP5Z1O43299 807 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 OR6A2O95222 327 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 PCCBP05166 539 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 CCNYL3P0C7X3 344 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 PSMC3P17980 439 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 CTSOP43234 321 aaPredicted RBP7.33□□□□□ -1.24
CNOT4-206ENST00000428680 PTPN9P43378 593 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 CARSP49589 748 aaKnown RBP7.33□□□□□ -1.24
CNOT4-206ENST00000428680 MAPK10P53779 464 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 POU5F1Q01860 360 aaKnown RBP7.33□□□□□ -1.24
CNOT4-206ENST00000428680 ADAM15Q13444 863 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 DUSP6Q16828 381 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 ALG11Q2TAA5 492 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 PRSS58Q8IYP2 241 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 TTC29Q8NA56 475 aaPredicted RBP7.33□□□□□ -1.24
CNOT4-206ENST00000428680 ZNF461Q8TAF7 563 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 MYCBPAPQ8TBZ2 947 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 RHBDD1Q8TEB9 315 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 FUBP3Q96I24 572 aaKnown RBP eCLIP7.33□□□□□ -1.24
CNOT4-206ENST00000428680 IGSF21Q96ID5 467 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 CCDC138Q96M89 665 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 DCBLD2Q96PD2 775 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 SERPINI1Q99574 410 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 HERC2P3Q9BVR0 1158 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 ZCWPW1Q9H0M4 648 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 ADAMTS10Q9H324 1103 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 TRIT1Q9H3H1 467 aaKnown RBP7.33□□□□□ -1.24
CNOT4-206ENST00000428680 LRRC40Q9H9A6 602 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 KLHL28Q9NXS3 571 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 WNT6Q9Y6F9 365 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 MYO5AQ9Y4I1 1855 aaKnown RBP7.33□□□□□ -1.24
CNOT4-206ENST00000428680 SMAPO00193 183 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 MDM4O15151 490 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 COMTP21964 271 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 SERPINB9P50453 376 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 SLC5A3P53794 718 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 GCNT1Q02742 428 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 MGAT3Q09327 533 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 MTM1Q13496 603 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 TEAD2Q15562 447 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 EMC10Q5UCC4 262 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 PHLDB3Q6NSJ2 640 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 DET1Q7L5Y6 550 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 ARID3BQ8IVW6 561 aaPredicted RBP7.33□□□□□ -1.24
CNOT4-206ENST00000428680 TMEM161BQ8NDZ6 487 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 FAM3CQ92520 227 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 TADA1Q96BN2 335 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 IRAK3Q9Y616 596 aa7.33□□□□□ -1.24
CNOT4-206ENST00000428680 VSTM5A8MXK1 200 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 PRR5-ARHGAP8B1AHC4 643 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 VPS4BO75351 444 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 AKAP3O75969 853 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 POP4O95707 220 aaKnown RBP7.32□□□□□ -1.24
CNOT4-206ENST00000428680 GUCA1CO95843 209 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 MMEP08473 750 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 CYP3A5P20815 502 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 MAPK1P28482 360 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 HOXC12P31275 282 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 MLLT6P55198 1093 aaPredicted RBP7.32□□□□□ -1.24
CNOT4-206ENST00000428680 ARHGAP8P85298 464 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 BNC1Q01954 994 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 SPIDRQ14159 915 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 SF1Q15637 639 aaKnown RBP7.32□□□□□ -1.24
CNOT4-206ENST00000428680 TXNDC8Q6A555 127 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 FAM9CQ8IZT9 166 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 BSNDQ8WZ55 320 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 UBE2E3Q969T4 207 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 AP2M1Q96CW1 435 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 REPS1Q96D71 796 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 COPS8Q99627 209 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 SEMA3CQ99985 751 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 WRAP53Q9BUR4 548 aaKnown RBP7.32□□□□□ -1.24
CNOT4-206ENST00000428680 DUSP16Q9BY84 665 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 NRDE2Q9H7Z3 1164 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 LMAN1LQ9HAT1 526 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 TRHDEQ9UKU6 1024 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 CYP8B1Q9UNU6 501 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 A0A1B0GVM2 712 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 TCAF2A6NFQ2 919 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 B4DGG1 531 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 FKBP9O95302 570 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 KRT6AP02538 564 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 KRT6BP04259 564 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 AMPD1P23109 780 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 PPP2R1BP30154 601 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 HOXD11P31277 338 aaPredicted RBP7.32□□□□□ -1.24
CNOT4-206ENST00000428680 HNF4AP41235 474 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 TNFSF9P41273 254 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 KRT6CP48668 564 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 BLVRAP53004 296 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 CACHD1Q5VU97 1274 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 DENND1BQ6P3S1 775 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 CNSTQ6PJW8 725 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 AGMOQ6ZNB7 445 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 C15orf39Q6ZRI6 1047 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 FKBP9P1Q75LS8 142 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 FAM228AQ86W67 206 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 LRRC49Q8IUZ0 686 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 LRRC8AQ8IWT6 810 aa7.32□□□□□ -1.24
CNOT4-206ENST00000428680 SCAIQ8N9R8 606 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms