RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 OTUD1Q5VV17 481 aaPredicted RBP18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 KIAA1161Q6NSJ0 714 aa18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 SETD3Q86TU7 594 aaPredicted RBP18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 PARGQ86W56 976 aa18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 TTC9Q92623 222 aa18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 FEM1CQ96JP0 617 aa18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 TIGD1Q96MW7 591 aa18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 WDCPQ9H6R7 721 aa18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 ANLNQ9NQW6 1124 aa18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 GPR27Q9NS67 375 aa18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 NCKIPSDQ9NZQ3 722 aa18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 AHCTF1Q8WYP5 2266 aa18.69■□□□□ 0.58
UPK3BP1-201ENST00000428678 SPTY2D1-AS1A0A0U1RR47 76 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 A0A1W2PNU3 283 aaPredicted RBP18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 AQP9O43315 295 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 LZTS3O60299 673 aaPredicted RBP18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 ADRB3P13945 408 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 BMP6P22004 513 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 OR1E1P30953 314 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 RABIFP47224 123 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 DNA2P51530 1060 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 MARSP56192 900 aaKnown RBP18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 SNX16P57768 344 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 SLC6A3Q01959 620 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 PDE1CQ14123 709 aaPredicted RBP18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 BRMS1LQ5PSV4 323 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 FOXR1Q6PIV2 292 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 TRIM65Q6PJ69 517 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 FOXR2Q6PJQ5 311 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 IGF2-ASQ6U949 168 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 CRTC1Q6UUV9 634 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 LRRC31Q6UY01 552 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 RBM44Q6ZP01 1051 aaKnown RBP18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 SLC26A9Q7LBE3 791 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 OR7D4Q8NG98 312 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 LMX1AQ8TE12 382 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 FAM81BQ96LP2 452 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 SLC46A1Q96NT5 459 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 SPON2Q9BUD6 331 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 SRRTQ9BXP5 876 aaKnown RBP18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 ARHGEF38Q9NXL2 777 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 MPP6Q9NZW5 540 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 PCDHGC3Q9UN70 934 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 FADS3Q9Y5Q0 445 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 CSNK1G3Q9Y6M4 447 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 WASF2Q9Y6W5 498 aa18.68■□□□□ 0.58
UPK3BP1-201ENST00000428678 COL27A1Q8IZC6 1860 aaPredicted RBP18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 B8ZZF3 427 aa18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 PYCARD-AS1I3L0S3 204 aa18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 FPGTO14772 594 aa18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 JUNDP17535 347 aa18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 TFE3P19532 575 aaPredicted RBP18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 ITGB7P26010 798 aa18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 CXCR3P49682 368 aa18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 SULT1E1P49888 294 aa18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 RNASE9P60153 205 aaKnown RBP18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 SGCGQ13326 291 aa18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 NR0B2Q15466 257 aa18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 PTPN20Q4JDL3 420 aa18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 KIAA1614Q5VZ46 1190 aa18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 ZNF683Q8IZ20 524 aa18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 SNRNP27Q8WVK2 155 aaKnown RBP18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 GRAMD1AQ96CP6 724 aa18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 CCDC97Q96F63 343 aaPredicted RBP18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 IL12RB2Q99665 862 aa18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 RRN3Q9NYV6 651 aa18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 KLF15Q9UIH9 416 aa18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 ENTPD2Q9Y5L3 495 aa18.67■□□□□ 0.58
UPK3BP1-201ENST00000428678 DOCK4Q8N1I0 1966 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 I6L893 689 aaPredicted RBP18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 BIN1O00499 593 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 MUSKO15146 869 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 SLC9A1P19634 815 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 L1CAMP32004 1257 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 KRT9P35527 623 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 APBA1Q02410 837 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 DEUP1Q05D60 604 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 PAK1Q13153 545 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 DRAP1Q14919 205 aaPredicted RBP18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 RETSATQ6NUM9 610 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 PARS2Q7L3T8 475 aaKnown RBP18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 PCDH20Q8N6Y1 951 aaKnown RBP18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 ZNF397Q8NF99 534 aaPredicted RBP18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 TPCN2Q8NHX9 752 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 NPY6RQ99463 290 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 HEPHQ9BQS7 1158 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 CEP44Q9C0F1 390 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 ZDHHC6Q9H6R6 413 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 WDR70Q9NW82 654 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 SALL4Q9UJQ4 1053 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 STAP1Q9ULZ2 295 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 PAXBP1Q9Y5B6 917 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 PCDHGA8Q9Y5G5 932 aa18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 TLN1Q9Y490 2541 aaKnown RBP18.66■□□□□ 0.58
UPK3BP1-201ENST00000428678 PMS2P1A4D2B8 440 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 EME2A4GXA9 379 aaPredicted RBP18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 IGLON5A6NGN9 336 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 DRGXA6NNA5 263 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 K7ENP7 123 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms