RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 CCND2P30279 289 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 ETFBP38117 255 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 MAGEA12P43365 314 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 ARCN1P48444 511 aaKnown RBP16.3■□□□□ 0.2
C9orf3-206ENST00000428313 RARRES1P49788 294 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 ILF2Q12905 390 aaKnown RBP16.3■□□□□ 0.2
C9orf3-206ENST00000428313 SLC12A1Q13621 1099 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 TFDP2Q14188 446 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 TMC5Q6UXY8 1006 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 CYP2R1Q6VVX0 501 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 CCDC81Q6ZN84 652 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 PRR23CQ6ZRP0 262 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 FAM20CQ8IXL6 584 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 SLC7A14Q8TBB6 771 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 ADAM32Q8TC27 787 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 ZFP90Q8TF47 636 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 CANT1Q8WVQ1 401 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 ATL1Q8WXF7 558 aa16.3■□□□□ 0.2
C9orf3-206ENST00000428313 SMPD3Q9NY59 655 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-206ENST00000428313 EIF3LQ9Y262 564 aaKnown RBP16.3■□□□□ 0.2
C9orf3-206ENST00000428313 SNPHO15079 494 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 UGT2B11O75310 529 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 RFPL2O75678 378 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 DNAJB5O75953 348 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 MYCLP1P12525 358 aaPredicted RBP16.29■□□□□ 0.2
C9orf3-206ENST00000428313 GARSP41250 739 aaKnown RBP16.29■□□□□ 0.2
C9orf3-206ENST00000428313 ZNF132P52740 706 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 NKX2-5P52952 324 aaPredicted RBP16.29■□□□□ 0.2
C9orf3-206ENST00000428313 PLA2G16P53816 162 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 IST1P53990 364 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 ECT2LQ008S8 904 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 PRKAA1Q13131 559 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 CCDC14Q49A88 953 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 CYBRD1Q53TN4 286 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 OFCC1Q8IZS5 231 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 PCDH20Q8N6Y1 951 aaKnown RBP16.29■□□□□ 0.2
C9orf3-206ENST00000428313 VPS33AQ96AX1 596 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 CENPNQ96H22 339 aaPredicted RBP16.29■□□□□ 0.2
C9orf3-206ENST00000428313 ZNF577Q9BSK1 485 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 NOL6Q9H6R4 1146 aaKnown RBP16.29■□□□□ 0.2
C9orf3-206ENST00000428313 MID2Q9UJV3 735 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 AQP12BA6NM10 295 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 SYCE1LA8MT33 242 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 KCNN4O15554 427 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 ICMTO60725 284 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 PRKACBP22694 351 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 SHMT1P34896 483 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 NAMPTP43490 491 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 PPM1JQ5JR12 505 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 CRTC3Q6UUV7 619 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 NPNTQ6UXI9 565 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 LINC00523Q86TU6 105 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 AQP12AQ8IXF9 295 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 MPP5Q8N3R9 675 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 TMEM161BQ8NDZ6 487 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 HDAC11Q96DB2 347 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 SNX18Q96RF0 628 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 APBA2Q99767 749 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 GATA5Q9BWX5 397 aaPredicted RBP16.29■□□□□ 0.2
C9orf3-206ENST00000428313 EMILIN2Q9BXX0 1053 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.29■□□□□ 0.28e-8■■■■■ 32.8
C9orf3-206ENST00000428313 TMEM181Q9P2C4 612 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 ADAM28Q9UKQ2 775 aa16.29■□□□□ 0.2
C9orf3-206ENST00000428313 H0YAE9 185 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 SYNCRIPO60506 623 aaKnown RBP16.28■□□□□ 0.2
C9orf3-206ENST00000428313 CLIC3O95833 236 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 CDH1P12830 882 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 FASP25445 335 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 ADORA2AP29274 412 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 CDH5P33151 784 aaPredicted RBP16.28■□□□□ 0.2
C9orf3-206ENST00000428313 CLK3P49761 638 aaKnown RBP16.28■□□□□ 0.2
C9orf3-206ENST00000428313 C19orf57Q0VDD7 668 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 BST2Q10589 180 aaKnown RBP16.28■□□□□ 0.2
C9orf3-206ENST00000428313 MMRN1Q13201 1228 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 TBCELQ5QJ74 424 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 TMEM198Q66K66 360 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 SLFN13Q68D06 897 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 HACD2Q6Y1H2 254 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 SLC16A12Q6ZSM3 486 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 SLCO6A1Q86UG4 719 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 GRAMD2AQ8IUY3 354 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 SCML4Q8N228 414 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 ASCC1Q8N9N2 400 aaKnown RBP16.28■□□□□ 0.2
C9orf3-206ENST00000428313 FTHL17Q9BXU8 183 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 TRIM15Q9C019 465 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 CACNA2D2Q9NY47 1150 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 VWA7Q9Y334 891 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 DGKBQ9Y6T7 804 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 BCLAF3A2AJT9 711 aaKnown RBP16.28■□□□□ 0.2
C9orf3-206ENST00000428313 KCNU1A8MYU2 1149 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 EVPLLA8MZ36 301 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 GABBR2O75899 941 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 ENDOD1O94919 500 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 C4BPAP04003 597 aaKnown RBP16.28■□□□□ 0.2
C9orf3-206ENST00000428313 BMP4P12644 408 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 GARTP22102 1010 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 CASP3P42574 277 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 P2RX3P56373 397 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 COPZ1P61923 177 aa16.28■□□□□ 0.2
C9orf3-206ENST00000428313 ADARB1P78563 741 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms