RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 TAS2R13Q9NYV9 303 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 GPRC5DQ9NZD1 345 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 SNAP23O00161 211 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 CLDN4O14493 209 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 SEC22BO75396 215 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 PGK1P00558 417 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 ELFN1P0C7U0 828 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 RARGP13631 454 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 TCN1P20061 433 aaPredicted RBP5.8□□□□□ -1.48
HERC4-206ENST00000427635 CDH3P22223 829 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 GABRR2P28476 465 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 PTGS2P35354 604 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 MMP13P45452 471 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 ZNF135P52742 658 aaPredicted RBP5.8□□□□□ -1.48
HERC4-206ENST00000427635 PRKAG1P54619 331 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 GPM6BQ13491 265 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 PCBP1Q15365 356 aaKnown RBP eCLIP5.8□□□□□ -1.48
HERC4-206ENST00000427635 CARTPTQ16568 116 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 SEZ6Q53EL9 994 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 GALNTL5Q7Z4T8 443 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 ZNF34Q8IZ26 560 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 CDYL2Q8N8U2 506 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 ATG16L2Q8NAA4 619 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 OR5T3Q8NGG3 340 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 SPPL2AQ8TCT8 520 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 PIGKQ92643 395 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 NKD1Q969G9 470 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 SGF29Q96ES7 293 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 POP1Q99575 1024 aaKnown RBP5.8□□□□□ -1.48
HERC4-206ENST00000427635 C7orf25Q9BPX7 421 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 OSBPL8Q9BZF1 889 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 CATSPERZQ9NTU4 200 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 MTO1Q9Y2Z2 717 aaKnown RBP5.8□□□□□ -1.48
HERC4-206ENST00000427635 ANO9A1A5B4 782 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 SCAMP1O15126 338 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 JMJD7P0C870 316 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 CNTFP26441 200 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 GSTM5P46439 218 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 MRPS22P82650 360 aaKnown RBP5.8□□□□□ -1.48
HERC4-206ENST00000427635 SMARCB1Q12824 385 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 PTPN21Q16825 1174 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 EOGTQ5NDL2 527 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 DCLRE1AQ6PJP8 1040 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 OTOP2Q7RTS6 562 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 ATCAYQ86WG3 371 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 RIBC1Q8N443 379 aaPredicted RBP5.8□□□□□ -1.48
HERC4-206ENST00000427635 C3orf20Q8ND61 904 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 RBM15Q96T37 977 aaKnown RBP eCLIP5.8□□□□□ -1.48
HERC4-206ENST00000427635 MLPHQ9BV36 600 aaPredicted RBP5.8□□□□□ -1.48
HERC4-206ENST00000427635 RASSF1Q9NS23 344 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 NKIRAS2Q9NYR9 191 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 HEBP2Q9Y5Z4 205 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.8□□□□□ -1.48
HERC4-206ENST00000427635 NRKQ7Z2Y5 1582 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 GPR75-ASB3A0A0A6YYF3 556 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 PP2D1A8MPX8 630 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 NR5A2O00482 541 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 ZNF862O60290 1169 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 ME2P23368 584 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 WARSP23381 471 aaKnown RBP5.8□□□□□ -1.48
HERC4-206ENST00000427635 MLH1P40692 756 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 SLC26A3P40879 764 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 DUSP3P51452 185 aaPredicted RBP5.8□□□□□ -1.48
HERC4-206ENST00000427635 ELP6Q0PNE2 266 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 GRB14Q14449 540 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 CHI3L2Q15782 390 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 CERCAMQ5T4B2 595 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 ANKFN1Q8N957 763 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 SMYD1Q8NB12 490 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 FRS2Q8WU20 508 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 DPF2Q92785 391 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 MTFMTQ96DP5 389 aaKnown RBP5.8□□□□□ -1.48
HERC4-206ENST00000427635 P2RX7Q99572 595 aaKnown RBP5.8□□□□□ -1.48
HERC4-206ENST00000427635 ACE2Q9BYF1 805 aaPredicted RBP5.8□□□□□ -1.48
HERC4-206ENST00000427635 MMADHCQ9H3L0 296 aaPredicted RBP5.8□□□□□ -1.48
HERC4-206ENST00000427635 B3GAT2Q9NPZ5 323 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 OPTCQ9UBM4 332 aa5.8□□□□□ -1.48
HERC4-206ENST00000427635 RNF17Q9BXT8 1623 aaKnown RBP5.8□□□□□ -1.48
HERC4-206ENST00000427635 FCHO1O14526 889 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 FPGTO14772 594 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 FGF10O15520 208 aaPredicted RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 TLX3O43711 291 aaPredicted RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 ENTPD5O75356 428 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 MICAL2O94851 1124 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 LARGE1O95461 756 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 JCHAINP01591 159 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 CYP1A1P04798 512 aaPredicted RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 CCNYL3P0C7X3 344 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 PTPN2P17706 415 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 TKTP29401 623 aaKnown RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 HOXC13P31276 330 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 FOXK1P85037 733 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 FOXO4P98177 505 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 VGLL4Q14135 290 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 NR1D2Q14995 579 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 RABL6Q3YEC7 729 aaPredicted RBP5.79□□□□□ -1.48
HERC4-206ENST00000427635 MROH9Q5TGP6 573 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 CNSTQ6PJW8 725 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 OTOP3Q7RTS5 596 aa5.79□□□□□ -1.48
HERC4-206ENST00000427635 GSPT2Q8IYD1 628 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms