RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 CLOCKO15516 846 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 EDN1P05305 212 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 TSPAN8P19075 237 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 GARTP22102 1010 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 SELENBP1Q13228 472 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 UBE2UQ5VVX9 321 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 RSBN1LQ6PCB5 846 aaPredicted RBP11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 USP43Q70EL4 1123 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 EPHX4Q8IUS5 362 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 THNSL1Q8IYQ7 743 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 CNDP1Q96KN2 507 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 GLT1D1Q96MS3 346 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 ILKAPQ9H0C8 392 aaPredicted RBP11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 ADNPQ9H2P0 1102 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 NANOGQ9H9S0 305 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 QPCTLQ9NXS2 382 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 DCDC2Q9UHG0 476 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 TRAF6Q9Y4K3 522 aa11.45□□□□□ -0.58
SEC61A1-202ENST00000424880 TMEM114B3SHH9 223 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 G3V2L1 256 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 EI24O14681 340 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 PFDN6O15212 129 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 MGEA5O60502 916 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 SNAP29O95721 258 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 TRUB2O95900 331 aaKnown RBP11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 RGS7P49802 495 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 SPCS2Q15005 226 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 TRNP1Q6NT89 227 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 B3GNT9Q6UX72 402 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 SCYL1Q96KG9 808 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 APOL2Q9BQE5 337 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 SPON1Q9HCB6 807 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 MKS1Q9NXB0 559 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 HMGXB4Q9UGU5 601 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 EVLQ9UI08 416 aaPredicted RBP11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 PCDHA11Q9Y5I1 949 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 A0A096LPK6 155 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 H0YJX3 145 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 NOL3O60936 208 aaKnown RBP11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 OXTRP30559 389 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 TFAMQ00059 246 aaKnown RBP11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 RHDQ02161 417 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 MERTKQ12866 999 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 MTERF2Q49AM1 385 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 REM2Q8IYK8 340 aaPredicted RBP11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 USP33Q8TEY7 942 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 LGMNQ99538 433 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 DOK1Q99704 481 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 PSD2Q9BQI7 771 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 SDCBP2Q9H190 292 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 CCDC68Q9H2F9 335 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 DHX33Q9H6R0 707 aaKnown RBP11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 RIC8BQ9NVN3 520 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 KLHL3Q9UH77 587 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 ATP11BQ9Y2G3 1177 aa11.44□□□□□ -0.58
SEC61A1-202ENST00000424880 GRID2O43424 1007 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 CHEK2O96017 543 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 SLC7A2P52569 658 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 AGKQ53H12 422 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 TBCELQ5QJ74 424 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 TTC30AQ86WT1 665 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 KIAA2013Q8IYS2 634 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 LSM14AQ8ND56 463 aaKnown RBP11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 HM13Q8TCT9 377 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 ZFP90Q8TF47 636 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 ELMO1Q92556 727 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 ASB9Q96DX5 294 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 FAR2Q96K12 515 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 MSTO1Q9BUK6 570 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 GLIS2Q9BZE0 524 aaPredicted RBP11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 RNF38Q9H0F5 515 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 TASP1Q9H6P5 420 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 ZBTB26Q9HCK0 441 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 FAM49BQ9NUQ9 324 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 MTMR10Q9NXD2 777 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 MOCS1Q9NZB8 636 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 NYAP2Q9P242 653 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 GABBR1Q9UBS5 961 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 ZNF229Q9UJW7 825 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 MAGED1Q9Y5V3 778 aaPredicted RBP11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 ANKRD34BA5PLL1 514 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 NEMP2A6NFY4 417 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 TRIM38O00635 465 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 HDAC3O15379 428 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 MYL4P12829 197 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 CHRM3P20309 590 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 ATP6V1B2P21281 511 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 CES1P23141 567 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 IL4RP24394 825 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 SEPHS1P49903 392 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 FAM214AQ32MH5 1076 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 FAM209AQ5JX71 171 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 FSTL4Q6MZW2 842 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 STRA8Q7Z7C7 330 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 PDZD8Q8NEN9 1154 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 ABHD11Q8NFV4 315 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 PCDH19Q8TAB3 1148 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 ADAMTS16Q8TE57 1224 aa11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 PRMT6Q96LA8 375 aaPredicted RBP11.43□□□□□ -0.58
SEC61A1-202ENST00000424880 MRIQ9BWK5 157 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms